Detailed information NTG0024005

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BLI_RS05265
• Genome accession: NC_006322
• Coordinates: 1065555..1066673 (+)
• Length: 372 a.a.
• NCBI ID: WP_011197708.1
• Uniprot ID: Q65LU3
• Organism: Bacillus licheniformis DSM 13 = ATCC 14580
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1060555..1071673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BLI_RS05240 (BLi01058)	-	1061202..1061555 (+)	354	WP_003180211.1	YlbF family regulator	-
BLI_RS05250 (BLi01060)	-	1062002..1062865 (+)	864	WP_011197705.1	Cof-type HAD-IIB family hydrolase	-
BLI_RS05255 (BLi01061)	-	1063008..1064516 (+)	1509	WP_011197706.1	coproporphyrinogen III oxidase	-
BLI_RS05260 (BLi01062)	-	1064652..1065428 (+)	777	WP_011197707.1	enoyl-CoA hydratase	-
BLI_RS05265 (BLi01063)	rapC	1065555..1066673 (+)	1119	WP_011197708.1	Rap family tetratricopeptide repeat protein	Regulator
BLI_RS22320	-	1066663..1066800 (+)	138	WP_016886158.1	hypothetical protein	-
BLI_RS05270 (BLi01064)	-	1066805..1067083 (+)	279	WP_003180226.1	hypothetical protein	-
BLI_RS05275 (BLi01065)	-	1067158..1067343 (-)	186	WP_003180228.1	YhzD family protein	-
BLI_RS05280 (BLi01066)	-	1067461..1068357 (+)	897	WP_011197710.1	ABC transporter ATP-binding protein	-
BLI_RS05285 (BLi01067)	-	1068350..1069618 (+)	1269	WP_003180232.1	ABC transporter permease	-
BLI_RS05290 (BLi01068)	-	1069738..1070964 (+)	1227	WP_009328954.1	metallophosphoesterase family protein	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43384.09 Da
• Isoelectric Point: 5.7199

>NTDB_id=24005 BLI_RS05265 WP_011197708.1 1065555..1066673(+) (rapC) [Bacillus licheniformis DSM 13 = ATCC 14580]
MKQKIPSEYVARKLNDWYNAIRKNQIAASESLKAEILNDFQDMEENRDVLLYYSLLEFRHKLMLSYLKPKETENIEKNLR
DLEEKEDQMTGLLNYYYWFFKGMYEFKQKRFVKAIGCYKTAEQKVSALEDEVEKAEFYYKLAEIYYYINQRYLSINYATL
ASDIFNRYETLKEKKIFCDFIIAGNWVESMTYGPALKSLANALEDARKIKNSHLTAAAHFNLGNCYFHQESYREASDHME
SALSIFEQESSSYIPKVLYNLMYVRLKQGNHAGAAACYEKGIRSAASLGDEEHAAKLNILCGLYLDGGDQKAVENGFDYL
ESNHLYAAVEELALDAAQYYNQIERLKDSIFYYEKCAQASRKIKRGDALYES

Nucleotide

• Length: 1119 bp

>NTDB_id=24005 BLI_RS05265 WP_011197708.1 1065555..1066673(+) (rapC) [Bacillus licheniformis DSM 13 = ATCC 14580]
TTGAAACAGAAGATTCCATCTGAATACGTTGCTAGAAAGCTGAATGATTGGTACAACGCCATTCGGAAAAATCAGATCGC
CGCCAGTGAATCATTGAAAGCGGAAATTTTAAATGATTTTCAAGACATGGAAGAAAATCGGGACGTCCTGCTCTACTATT
CGCTGCTTGAATTCAGGCATAAACTGATGCTCAGCTATTTGAAACCGAAAGAGACTGAAAATATTGAAAAAAACCTCCGC
GACTTAGAAGAAAAAGAAGACCAAATGACGGGTTTATTAAACTATTATTACTGGTTTTTTAAAGGGATGTATGAGTTCAA
ACAAAAGCGGTTCGTCAAAGCAATCGGCTGCTATAAAACGGCTGAACAAAAAGTCAGCGCACTGGAAGACGAGGTTGAAA
AAGCGGAATTTTATTATAAGCTTGCGGAAATCTACTATTATATCAACCAGAGATACCTGTCGATCAACTATGCGACGCTA
GCTTCCGACATTTTTAACCGGTATGAAACGCTAAAAGAAAAAAAGATTTTCTGCGATTTTATCATTGCCGGTAATTGGGT
TGAATCGATGACATACGGACCCGCGCTGAAAAGCCTGGCCAATGCGCTTGAAGACGCCAGGAAAATCAAAAACAGCCATT
TGACGGCAGCCGCTCATTTTAATTTGGGAAATTGCTATTTCCACCAAGAATCGTACCGGGAAGCCTCAGATCATATGGAG
AGCGCCCTTTCCATTTTTGAACAGGAAAGTTCATCATATATTCCCAAAGTGCTGTACAACTTGATGTACGTCCGTCTCAA
GCAGGGGAACCATGCCGGAGCTGCCGCCTGTTATGAAAAAGGCATCCGAAGCGCGGCATCGCTCGGGGATGAAGAACACG
CGGCAAAGCTTAACATTCTGTGCGGGCTGTATTTAGACGGAGGGGATCAGAAAGCCGTGGAAAACGGATTTGATTATTTG
GAGTCAAATCATTTATATGCTGCTGTTGAAGAGCTGGCTTTAGATGCAGCCCAGTATTATAATCAAATTGAGCGGCTGAA
AGATTCCATTTTTTACTATGAAAAGTGCGCTCAGGCAAGTCGAAAAATCAAAAGGGGAGATGCGTTGTATGAAAGCTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_12) (195-248)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-64)

3D structure

• AlphaFold DB: Q65LU3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.166	100	0.374