Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M27_RS03105 Genome accession   NZ_CP028213
Coordinates   612110..612805 (+) Length   231 a.a.
NCBI ID   WP_070547660.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 607110..617805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS03080 (C7M27_00611) ytrB 607138..608016 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  C7M27_RS03085 (C7M27_00612) ytrC 608010..608996 (+) 987 WP_015483589.1 ABC transporter permease YtrC -
  C7M27_RS03090 (C7M27_00613) ytrD 609026..610003 (+) 978 WP_041851122.1 ABC transporter permease YtrD -
  C7M27_RS03095 (C7M27_00614) ytrE 610018..610713 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  C7M27_RS03100 (C7M27_00615) ytrF 610703..612013 (+) 1311 WP_021480351.1 ABC transporter permease YtrF -
  C7M27_RS03105 (C7M27_00616) braR 612110..612805 (+) 696 WP_070547660.1 two-component response regulator BceR Regulator
  C7M27_RS03110 (C7M27_00617) bceS 612798..613802 (+) 1005 WP_128740656.1 two-component sensor histidine kinase BceS -
  C7M27_RS03115 (C7M27_00618) bceA 613904..614665 (+) 762 WP_128740655.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M27_RS03120 (C7M27_00619) bceB 614655..616595 (+) 1941 WP_128740654.1 bacitracin ABC transporter permease BceB -
  C7M27_RS03125 (C7M27_00620) yttA 616632..617378 (-) 747 WP_128740653.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26909.77 Da        Isoelectric Point: 5.3731

>NTDB_id=240004 C7M27_RS03105 WP_070547660.1 612110..612805(+) (braR) [Bacillus subtilis strain SRCM102749]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=240004 C7M27_RS03105 WP_070547660.1 612110..612805(+) (braR) [Bacillus subtilis strain SRCM102749]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGTGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGTCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377