Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M27_RS00715 Genome accession   NZ_CP028213
Coordinates   150104..150817 (+) Length   237 a.a.
NCBI ID   WP_128740758.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 145104..155817
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS00680 (C7M27_00136) rppI 145350..145826 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M27_RS00685 (C7M27_00137) rapZ 145851..146738 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C7M27_RS00690 (C7M27_00138) mgfK 146740..147693 (+) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  C7M27_RS00695 (C7M27_00139) whiA 147716..148666 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M27_RS00700 (C7M27_00140) crh 148690..148947 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M27_RS00705 (C7M27_00141) yvcN 148948..149712 (+) 765 WP_015714771.1 arylamine N-acetyltransferase -
  C7M27_RS00710 (C7M27_00142) - 149748..149957 (-) 210 WP_014665489.1 hypothetical protein -
  C7M27_RS00715 (C7M27_00143) braR 150104..150817 (+) 714 WP_128740758.1 two-component system response regulator PsdR Regulator
  C7M27_RS00720 (C7M27_00144) psdS 150811..151881 (+) 1071 WP_128740757.1 two-component sensor histidine kinase PsdS -
  C7M27_RS00725 (C7M27_00145) psdA 151964..152743 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M27_RS00730 (C7M27_00146) psdB 152718..154658 (+) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C7M27_RS00735 (C7M27_00147) ghrB 154695..155672 (-) 978 WP_128740756.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27520.49 Da        Isoelectric Point: 4.8300

>NTDB_id=239993 C7M27_RS00715 WP_128740758.1 150104..150817(+) (braR) [Bacillus subtilis strain SRCM102749]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAVQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLSIYPDQHEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=239993 C7M27_RS00715 WP_128740758.1 150104..150817(+) (braR) [Bacillus subtilis strain SRCM102749]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTAGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGTACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCATTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTATCGATTTATCCTGATCAACATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

44.643

94.515

0.422