Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M26_RS20260 Genome accession   NZ_CP028212
Coordinates   3861054..3861749 (+) Length   231 a.a.
NCBI ID   WP_004399109.1    Uniprot ID   O34951
Organism   Bacillus subtilis strain SRCM102748     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3856054..3866749
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS20235 (C7M26_03986) ytrB 3856082..3856960 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  C7M26_RS20240 (C7M26_03987) ytrC 3856954..3857940 (+) 987 WP_015714563.1 ABC transporter permease YtrC -
  C7M26_RS20245 (C7M26_03988) ytrD 3857970..3858947 (+) 978 WP_032722368.1 ABC transporter permease YtrD -
  C7M26_RS20250 (C7M26_03989) ytrE 3858962..3859657 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  C7M26_RS20255 (C7M26_03990) ytrF 3859647..3860957 (+) 1311 WP_004398682.1 ABC transporter permease YtrF -
  C7M26_RS20260 (C7M26_03991) braR 3861054..3861749 (+) 696 WP_004399109.1 two-component response regulator BceR Regulator
  C7M26_RS20265 (C7M26_03992) bceS 3861742..3862746 (+) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  C7M26_RS20270 (C7M26_03993) bceA 3862848..3863609 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M26_RS20275 (C7M26_03994) bceB 3863599..3865539 (+) 1941 WP_032722367.1 bacitracin ABC transporter permease BceB -
  C7M26_RS20280 (C7M26_03995) yttA 3865576..3866322 (-) 747 WP_003229141.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26866.74 Da        Isoelectric Point: 5.3731

>NTDB_id=239970 C7M26_RS20260 WP_004399109.1 3861054..3861749(+) (braR) [Bacillus subtilis strain SRCM102748]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=239970 C7M26_RS20260 WP_004399109.1 3861054..3861749(+) (braR) [Bacillus subtilis strain SRCM102748]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTGC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGTCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O34951

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377