Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M26_RS17660 Genome accession   NZ_CP028212
Coordinates   3369103..3369816 (+) Length   237 a.a.
NCBI ID   WP_032722590.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102748     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3364103..3374816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS17625 (C7M26_03464) rppI 3364349..3364825 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M26_RS17630 (C7M26_03465) rapZ 3364850..3365737 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C7M26_RS17635 (C7M26_03466) mgfK 3365739..3366692 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C7M26_RS17640 (C7M26_03467) whiA 3366715..3367665 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M26_RS17645 (C7M26_03468) crh 3367689..3367946 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M26_RS17650 (C7M26_03469) yvcN 3367947..3368711 (+) 765 WP_080287633.1 arylamine N-acetyltransferase -
  C7M26_RS17655 (C7M26_03470) - 3368747..3368956 (-) 210 WP_029318346.1 hypothetical protein -
  C7M26_RS17660 (C7M26_03471) braR 3369103..3369816 (+) 714 WP_032722590.1 two-component system response regulator PsdR Regulator
  C7M26_RS17665 (C7M26_03472) psdS 3369810..3370880 (+) 1071 WP_032722588.1 two-component sensor histidine kinase PsdS -
  C7M26_RS17670 (C7M26_03473) psdA 3370963..3371742 (+) 780 WP_032722587.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M26_RS17675 (C7M26_03474) psdB 3371717..3373657 (+) 1941 WP_032722585.1 lantibiotic ABC transporter permease PsdB -
  C7M26_RS17680 (C7M26_03475) ghrB 3373695..3374672 (-) 978 WP_080287632.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27496.36 Da        Isoelectric Point: 4.6062

>NTDB_id=239960 C7M26_RS17660 WP_032722590.1 3369103..3369816(+) (braR) [Bacillus subtilis strain SRCM102748]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVIAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=239960 C7M26_RS17660 WP_032722590.1 3369103..3369816(+) (braR) [Bacillus subtilis strain SRCM102748]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATAGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.982

94.515

0.435

Multiple sequence alignment