Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   STR_RS09510 Genome accession   NC_006449
Coordinates   1795405..1796172 (+) Length   255 a.a.
NCBI ID   WP_011226714.1    Uniprot ID   Q5M227
Organism   Streptococcus thermophilus CNRZ1066     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1790405..1801172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STR_RS09495 (str2022) - 1792721..1793404 (-) 684 WP_011226711.1 YoaK family protein -
  STR_RS09500 (str2023) rlmH 1793420..1793899 (-) 480 WP_011226712.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STR_RS09505 (str2024) htrA 1794104..1795339 (+) 1236 WP_011227629.1 S1C family serine protease Regulator
  STR_RS09510 (str2025) spo0J 1795405..1796172 (+) 768 WP_011226714.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29485.94 Da        Isoelectric Point: 9.6649

>NTDB_id=23996 STR_RS09510 WP_011226714.1 1795405..1796172(+) (spo0J) [Streptococcus thermophilus CNRZ1066]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNALRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDIHVKDKEKELERLLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=23996 STR_RS09510 WP_011226714.1 1795405..1796172(+) (spo0J) [Streptococcus thermophilus CNRZ1066]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGCTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATATCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATTACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q5M227

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569


Multiple sequence alignment