Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M26_RS15110 Genome accession   NZ_CP028212
Coordinates   2863373..2864062 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain SRCM102748     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2858373..2869062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS15090 (C7M26_02967) iolG 2859527..2860561 (+) 1035 WP_014481414.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  C7M26_RS15095 (C7M26_02968) iolH 2860581..2861450 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  C7M26_RS15100 (C7M26_02969) iolI 2861536..2862372 (+) 837 WP_019712597.1 2-keto-myo-inositol isomerase -
  C7M26_RS15105 (C7M26_02970) iolJ 2862393..2863265 (+) 873 WP_019712596.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C7M26_RS15110 (C7M26_02971) braR 2863373..2864062 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  C7M26_RS15115 (C7M26_02972) yxdK 2864059..2865036 (+) 978 WP_019712858.1 two-component system sensor histidine kinase YxdK -
  C7M26_RS15120 (C7M26_02973) yxdL 2865180..2865953 (+) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  C7M26_RS15125 (C7M26_02974) yxdM 2865928..2867796 (+) 1869 WP_032722764.1 ABC transporter permease YxdM -
  C7M26_RS15130 (C7M26_02975) yxeA 2867810..2868157 (+) 348 WP_003227084.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=239945 C7M26_RS15110 WP_003243527.1 2863373..2864062(+) (braR) [Bacillus subtilis strain SRCM102748]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=239945 C7M26_RS15110 WP_003243527.1 2863373..2864062(+) (braR) [Bacillus subtilis strain SRCM102748]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAAATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment