Detailed information NTG0239924

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: CG450_RS21875
• Genome accession: NZ_CP022477
• Coordinates: 4177261..4178640 (-)
• Length: 459 a.a.
• NCBI ID: WP_003178276.1
• Uniprot ID: A0AAP9UTP9
• Organism: Bacillus licheniformis strain BL-010
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4172261..4183640

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG450_RS21855	ispF	4173780..4174256 (-)	477	WP_003178280.1	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	-
CG450_RS21860	ispD	4174249..4174944 (-)	696	WP_003178279.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-
CG450_RS21865	-	4174961..4176049 (-)	1089	WP_009330350.1	PIN/TRAM domain-containing protein	-
CG450_RS21870	disA	4176181..4177257 (-)	1077	WP_003178277.1	DNA integrity scanning diadenylate cyclase DisA	-
CG450_RS21875	radA	4177261..4178640 (-)	1380	WP_003178276.1	DNA repair protein RadA	Machinery gene
CG450_RS21880	clpC	4178720..4181152 (-)	2433	WP_003178275.1	ATP-dependent protease ATP-binding subunit ClpC	Regulator
CG450_RS21885	-	4181149..4182240 (-)	1092	WP_003178273.1	protein arginine kinase	-
CG450_RS21890	-	4182240..4182794 (-)	555	WP_003178271.1	UvrB/UvrC motif-containing protein	-
CG450_RS21895	-	4182809..4183273 (-)	465	WP_003178269.1	CtsR family transcriptional regulator	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49818.25 Da
• Isoelectric Point: 7.4339

>NTDB_id=239924 CG450_RS21875 WP_003178276.1 4177261..4178640(-) (radA) [Bacillus licheniformis strain BL-010]
MAKTKTKFICHSCGYESAKWMGKCPGCGAWNTMVEETIKKPAANRRTAFSHSVQTVQKPSPLTSIETTEEPRIKTKLGEF
NRVLGNGIVKGSLVLIGGDPGIGKSTLLLQVSAQLADSKENVLYISGEESVKQTKLRADRLGINSPTLHVLSETDMEYIT
SSIEEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMRIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYF
EGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGAAGSSVVASMEGTRPVLVEIQALISPTSF
GNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAVAVSIASSFRDTPPHPTDCFIGEVGLT
GEVRRVSRIEQRVQEAAKLGFKRMIIPSANVEGWTKPKGIEVVGVENVAEALRASLGGS

Nucleotide

• Length: 1380 bp

>NTDB_id=239924 CG450_RS21875 WP_003178276.1 4177261..4178640(-) (radA) [Bacillus licheniformis strain BL-010]
ATGGCTAAAACAAAGACTAAATTCATTTGTCACTCATGCGGCTACGAATCCGCCAAGTGGATGGGGAAATGCCCCGGATG
CGGTGCATGGAATACCATGGTGGAAGAAACGATAAAAAAACCCGCCGCCAACAGAAGAACCGCTTTTTCACATTCCGTTC
AAACGGTGCAAAAGCCTTCACCTCTCACTTCAATTGAAACAACAGAAGAGCCGCGAATTAAAACGAAACTTGGCGAATTC
AACCGCGTCTTGGGAAACGGCATCGTCAAAGGTTCACTTGTTTTAATCGGAGGCGACCCCGGCATCGGGAAATCAACCTT
GCTGCTTCAAGTATCTGCCCAGCTCGCTGATTCAAAAGAAAATGTCCTGTACATCTCAGGCGAAGAATCGGTCAAGCAGA
CAAAGCTGAGAGCAGACCGTCTAGGTATCAACAGTCCCACTCTTCACGTTTTATCTGAAACCGATATGGAGTATATTACG
TCTTCTATAGAAGAGATGAACCCATCATTCGTAGTGGTTGATTCGATTCAAACCGTTTACCAAAGTGATATCACATCCGC
TCCGGGCAGCGTCTCCCAGGTCAGGGAATGCACCGCTGAGCTGATGAGAATTGCAAAAACGAAAGGGATTCCAATATTTA
TCGTCGGGCATGTCACAAAAGAAGGTTCGATTGCCGGACCGAGACTTCTGGAACATATGGTCGACACCGTCCTTTACTTT
GAAGGTGAGCGGCATCATACATTTCGGATTTTAAGAGCCGTCAAAAACCGGTTTGGATCAACGAATGAAATGGGAATCTT
TGAAATGAGGGAAGAGGGCCTGACAGAGGTGCTGAATCCGTCAGAAATCTTTCTCGAAGAGCGCTCGGCGGGAGCGGCCG
GATCGAGTGTCGTGGCCTCAATGGAAGGCACGAGGCCAGTCTTAGTAGAGATTCAGGCGCTGATTTCCCCCACGAGCTTT
GGGAATCCGCGCCGGATGGCAACCGGGATTGATCATAACCGCGTCTCATTGCTAATGGCAGTTTTAGAAAAAAGGGTTGG
ACTGCTGCTGCAAAATCAAGACGCCTATTTAAAAGTCGCCGGAGGCGTCAAGCTGGACGAGCCAGCGATTGACCTCGCCG
TTGCAGTGAGCATCGCCTCAAGCTTCAGAGACACCCCGCCTCATCCGACGGATTGTTTTATCGGAGAAGTCGGATTGACA
GGGGAGGTCCGCAGAGTATCAAGGATAGAACAGAGGGTGCAGGAAGCGGCGAAGCTTGGTTTTAAAAGAATGATTATTCC
TTCTGCAAATGTAGAAGGATGGACAAAGCCGAAAGGAATCGAAGTCGTCGGCGTTGAAAATGTAGCTGAGGCCCTTCGAG
CTTCATTAGGAGGATCATAA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• AAA domain (AAA_25) (66-222)

• Subunit ChlI of Mg-chelatase (ChlI) (365-430)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	91.266	99.782	0.911
radA	Streptococcus mitis NCTC 12261	62.031	98.693	0.612
radA	Streptococcus pneumoniae Rx1	62.031	98.693	0.612
radA	Streptococcus pneumoniae D39	62.031	98.693	0.612
radA	Streptococcus pneumoniae R6	62.031	98.693	0.612
radA	Streptococcus pneumoniae TIGR4	62.031	98.693	0.612
radA	Streptococcus mitis SK321	61.81	98.693	0.61