Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   C7M26_RS10750 Genome accession   NZ_CP028212
Coordinates   2016715..2017845 (-) Length   376 a.a.
NCBI ID   WP_032722985.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102748     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 2011715..2022845
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS10705 (C7M26_02108) cotJC 2011802..2012371 (-) 570 WP_003233850.1 spore coat protein CotJC -
  C7M26_RS10710 (C7M26_02109) cotJB 2012386..2012649 (-) 264 WP_003219491.1 spore coat protein CotJB -
  C7M26_RS10715 (C7M26_02110) cotJA 2012633..2012881 (-) 249 WP_003219489.1 spore coat-associated protein CotJA -
  C7M26_RS10720 (C7M26_02111) yesF 2013007..2013872 (-) 866 Protein_2140 NAD-dependent epimerase/dehydratase family protein -
  C7M26_RS10725 (C7M26_02112) yesE 2013869..2014315 (-) 447 WP_032722988.1 nuclear transport factor 2 family protein -
  C7M26_RS10730 (C7M26_02113) yezE 2014394..2014978 (-) 585 WP_032722987.1 TetR/AcrR family transcriptional regulator -
  C7M26_RS10735 (C7M26_02114) yeeK 2015093..2015539 (-) 447 WP_015715466.1 spore coat protein YeeK -
  C7M26_RS10740 (C7M26_02115) yeeI 2015673..2016392 (-) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  C7M26_RS10745 (C7M26_02116) phrH 2016552..2016725 (-) 174 WP_032722986.1 phosphatase RapH inhibitor PhrH -
  C7M26_RS10750 (C7M26_02117) rapC 2016715..2017845 (-) 1131 WP_032722985.1 response regulator aspartate phosphatase RapH Regulator
  C7M26_RS10755 (C7M26_02118) - 2017991..2019151 (-) 1161 WP_032722984.1 lysozyme inhibitor LprI family protein -
  C7M26_RS10760 (C7M26_02119) - 2019356..2019793 (-) 438 WP_015252628.1 hypothetical protein -
  C7M26_RS10765 (C7M26_02120) - 2020005..2021013 (-) 1009 Protein_2149 hypothetical protein -
  C7M26_RS10770 (C7M26_02121) - 2021194..2022351 (+) 1158 Protein_2150 T7SS effector LXG polymorphic toxin -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 44027.49 Da        Isoelectric Point: 6.1531

>NTDB_id=239914 C7M26_RS10750 WP_032722985.1 2016715..2017845(-) (rapC) [Bacillus subtilis strain SRCM102748]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVKQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGKTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLETALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLCWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=239914 C7M26_RS10750 WP_032722985.1 2016715..2017845(-) (rapC) [Bacillus subtilis strain SRCM102748]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGAAGCAGGACATTCAGCAAATGGAAGAAGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGTCACCAGCTGATGCTTGATTATTTGGAGCCGGGAAAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGACGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTATGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTACTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.691

100

0.407
  rapF Bacillus subtilis subsp. subtilis str. 168

40.053

100

0.402