Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   CG450_RS15890 Genome accession   NZ_CP022477
Coordinates   2991990..2993819 (-) Length   609 a.a.
NCBI ID   WP_281510530.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL-010     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2986990..2998819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS15855 - 2987374..2988009 (-) 636 WP_009328818.1 GTP pyrophosphokinase family protein -
  CG450_RS15860 - 2988041..2988406 (-) 366 WP_009328819.1 hypothetical protein -
  CG450_RS15865 - 2988537..2989109 (+) 573 WP_009328820.1 CYTH domain-containing protein -
  CG450_RS15870 - 2989122..2989775 (+) 654 WP_011197774.1 lytic transglycosylase domain-containing protein -
  CG450_RS15875 - 2990057..2990455 (+) 399 WP_003180652.1 thiol management oxidoreductase -
  CG450_RS15880 spxH 2990452..2991354 (+) 903 WP_069500397.1 protease adaptor protein SpxH -
  CG450_RS23065 - 2991766..2991933 (+) 168 WP_009328823.1 hypothetical protein -
  CG450_RS15890 pepF 2991990..2993819 (-) 1830 WP_281510530.1 oligoendopeptidase F Regulator
  CG450_RS15895 - 2994032..2995180 (-) 1149 WP_009328825.1 competence protein CoiA family protein -
  CG450_RS15900 - 2995298..2996893 (+) 1596 WP_071583753.1 sensor histidine kinase -
  CG450_RS15905 - 2996916..2997632 (+) 717 WP_009328827.1 response regulator -

Sequence

Protein


Download         Length: 609 a.a.        Molecular weight: 70353.01 Da        Isoelectric Point: 4.8902

>NTDB_id=239903 CG450_RS15890 WP_281510530.1 2991990..2993819(-) (pepF) [Bacillus licheniformis strain BL-010]
MAEEKKSKKLPSREEVKQEDTWRLEDIFPSDDAWNEEFQAVKELLPKLSEFKGKLGHSADDLYEALTYQDKVMERLGKLY
TYAHMRYDQDTGNSFYQGLNDKAANLYTQAASATAYMVPEILSIQEEKLQQFLLEKEELKLYSHALEEINKERPHVLSEE
EEGILAEASDVLSSPSNTFGMLNNADMEFPEITDENGEKVQLTHGNYITFLESENRDVRRAAFKAVYETYGRYKNTLAST
LSGAVKKDNFYAKVKHYKSAREAALSRNSIPEEVYDNLVSTINKHLPLLHRYVELRKKVLELDEVHMYDLYTPLVKDSGM
KVTYEQAKAYMLKGLAPLGEEYSSILKEGLNNRWVDVYENKGKRSGAYSSGTYGTNPYILMNWQDNVNNLFTLVHEFGHS
VHSYYTRKYQPYPYGNYSIFVAEVASTTNEALLGEYLLNTIEDEKQRLYILNHMLEGFKGTVFRQTMFAEFEHEIHVKAQ
EGEPLTPELLTSIYYDLNKKYFGDNIEIDKEIGLEWSRIPHFYYNYYVYQYATGFSAAQALSQQILKEGKSAVDRYIEFL
KAGSSDYPIEVLKKAGVDMTSSEPIEAACKKFEEQLNEMEELLQKVNHS

Nucleotide


Download         Length: 1830 bp        

>NTDB_id=239903 CG450_RS15890 WP_281510530.1 2991990..2993819(-) (pepF) [Bacillus licheniformis strain BL-010]
GTGGCTGAAGAAAAAAAATCGAAGAAACTGCCTTCAAGAGAAGAGGTGAAGCAAGAAGACACGTGGAGACTGGAGGATAT
CTTCCCGTCAGATGACGCTTGGAACGAGGAATTTCAAGCCGTTAAAGAACTGCTGCCCAAGCTTTCCGAATTCAAGGGCA
AGCTCGGCCATTCCGCCGATGATTTATATGAAGCGCTGACTTATCAGGATAAGGTGATGGAGCGTCTCGGGAAGCTGTAT
ACTTACGCTCATATGCGCTATGATCAGGATACGGGAAATTCTTTTTACCAAGGTCTCAATGATAAAGCGGCGAACCTCTA
TACTCAGGCTGCGAGCGCCACGGCCTACATGGTGCCGGAAATATTATCGATTCAGGAAGAAAAGCTTCAGCAGTTCCTGT
TGGAAAAAGAGGAATTAAAGCTTTACTCACACGCTCTCGAAGAAATCAATAAAGAGCGCCCTCATGTGCTTAGCGAGGAA
GAGGAAGGGATTTTGGCCGAAGCGTCTGATGTTCTTTCATCTCCTTCCAATACATTCGGCATGCTGAATAACGCCGATAT
GGAATTTCCGGAGATCACCGATGAAAACGGAGAAAAGGTGCAGCTCACACACGGCAATTATATCACCTTTTTGGAAAGCG
AGAACCGCGATGTCCGCCGCGCGGCATTCAAGGCCGTTTATGAAACATACGGCCGCTATAAAAACACGTTAGCTTCCACG
CTCAGCGGAGCTGTGAAAAAAGACAACTTTTATGCGAAGGTTAAACATTATAAATCGGCGCGGGAAGCTGCCTTGTCGCG
CAACAGCATTCCTGAAGAAGTCTACGACAATCTAGTCAGCACGATCAACAAGCATCTCCCGCTTCTTCACCGCTATGTTG
AGCTTAGAAAAAAAGTGCTTGAGCTTGATGAAGTGCACATGTATGACCTGTATACCCCTCTGGTCAAGGATTCTGGAATG
AAAGTCACTTACGAGCAGGCAAAGGCCTATATGCTGAAGGGTCTGGCGCCTTTGGGGGAAGAATATTCATCCATCCTGAA
AGAAGGATTGAACAACCGCTGGGTCGATGTGTATGAAAACAAAGGAAAACGAAGCGGCGCCTATTCTTCAGGAACTTACG
GAACCAATCCGTATATTTTGATGAACTGGCAGGACAACGTCAACAATCTGTTTACGCTCGTCCATGAATTCGGCCATTCC
GTGCACAGCTACTATACGAGAAAATATCAGCCTTACCCGTACGGTAACTACAGCATTTTCGTAGCCGAAGTTGCTTCTAC
GACGAATGAAGCGCTGTTGGGAGAATACCTGCTGAATACAATCGAAGATGAAAAACAGCGGCTCTATATTTTGAATCATA
TGCTCGAAGGCTTTAAAGGAACGGTTTTCAGACAGACGATGTTTGCCGAATTTGAACATGAGATCCATGTCAAAGCCCAG
GAAGGGGAACCGCTGACACCTGAGCTGTTAACGAGCATATACTATGATTTGAATAAGAAATATTTCGGAGACAATATTGA
GATTGATAAGGAAATCGGTCTTGAGTGGTCAAGAATTCCGCATTTCTATTACAATTATTATGTATATCAGTATGCGACAG
GCTTCAGTGCAGCTCAGGCGCTCAGCCAGCAGATTTTAAAAGAAGGCAAATCGGCTGTTGACCGCTATATTGAGTTCTTG
AAAGCTGGAAGCTCGGATTATCCGATTGAAGTGCTGAAAAAAGCCGGCGTCGATATGACGTCTTCAGAGCCGATTGAAGC
TGCGTGCAAAAAGTTTGAAGAGCAGCTGAACGAAATGGAAGAACTCCTGCAAAAAGTCAATCATTCATAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(210-589)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

50.754

98.03

0.498

Multiple sequence alignment