Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   CG450_RS09360 Genome accession   NZ_CP022477
Coordinates   1779899..1780699 (+) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain BL-010     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1774899..1785699
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS09340 - 1774921..1775766 (+) 846 WP_003183371.1 TlyA family RNA methyltransferase -
  CG450_RS09345 ahrC 1775932..1776381 (+) 450 WP_003183369.1 transcriptional regulator AhrC/ArgR -
  CG450_RS09350 recN 1776413..1778143 (+) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  CG450_RS09355 spoIVB 1778293..1779609 (+) 1317 WP_044051837.1 SpoIVB peptidase -
  CG450_RS09360 spo0A 1779899..1780699 (+) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  CG450_RS09365 - 1781072..1781368 (+) 297 WP_003183359.1 antimicrobial peptide LCI -
  CG450_RS09370 - 1781499..1781882 (+) 384 WP_003183357.1 serine O-acetyltransferase -
  CG450_RS09375 - 1782213..1783643 (+) 1431 WP_016886315.1 IS1182 family transposase -
  CG450_RS09380 - 1783917..1784237 (+) 321 WP_003183355.1 hypothetical protein -
  CG450_RS09385 - 1784273..1784893 (+) 621 WP_003183353.1 N-acetylmuramoyl-L-alanine amidase family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=239890 CG450_RS09360 WP_003183361.1 1779899..1780699(+) (spo0A) [Bacillus licheniformis strain BL-010]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=239890 CG450_RS09360 WP_003183361.1 1779899..1780699(+) (spo0A) [Bacillus licheniformis strain BL-010]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925

Multiple sequence alignment