Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C7M26_RS04935 Genome accession   NZ_CP028212
Coordinates   848491..849108 (+) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM102748     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 843491..854108
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M26_RS04900 (C7M26_00960) ynzD 843733..843906 (+) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -
  C7M26_RS04905 (C7M26_00961) yneF 843980..844198 (-) 219 WP_003221221.1 YneF family protein -
  C7M26_RS04910 (C7M26_00962) sirA 844284..844730 (-) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M26_RS04915 (C7M26_00963) recP/tkt 844883..846886 (-) 2004 WP_003231593.1 transketolase Machinery gene
  C7M26_RS04920 (C7M26_00964) ynzC 847055..847288 (-) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M26_RS04925 (C7M26_00965) dinL 847352..848005 (-) 654 WP_003231596.1 recombinase family protein -
  C7M26_RS04930 (C7M26_00966) yneA 848024..848341 (-) 318 WP_003231598.1 cell division suppressor protein YneA -
  C7M26_RS04935 (C7M26_00967) dinR/lexA 848491..849108 (+) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M26_RS22125 - 849445..849741 (-) 297 WP_223257629.1 hypothetical protein -
  C7M26_RS04940 (C7M26_00969) fosM 849650..850084 (-) 435 WP_003231604.1 FosM family fosfomycin resistance protein -
  C7M26_RS04945 (C7M26_00970) - 850292..850741 (+) 450 WP_003245454.1 YndM family protein -
  C7M26_RS04950 (C7M26_00971) pghL 850768..851526 (-) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  C7M26_RS04955 (C7M26_00972) - 851752..852066 (-) 315 WP_003245621.1 hypothetical protein -
  C7M26_RS04960 (C7M26_00973) yndJ 852154..853794 (-) 1641 WP_003231612.1 YndJ family protein -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=239863 C7M26_RS04935 WP_003238209.1 848491..849108(+) (dinR/lexA) [Bacillus subtilis strain SRCM102748]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=239863 C7M26_RS04935 WP_003238209.1 848491..849108(+) (dinR/lexA) [Bacillus subtilis strain SRCM102748]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGTTCTACTGTCCACGGCCATTTGGCCCGTTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCTGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment