Detailed information NTG0239858

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M26_RS02970
• Genome accession: NZ_CP028212
• Coordinates: 497547..498683 (-)
• Length: 378 a.a.
• NCBI ID: WP_114168633.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102748
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 492547..503683

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M26_RS02935 (C7M26_00572)	-	493926..494384 (+)	459	WP_109962768.1	YrhA family protein	-
C7M26_RS02940	bsrG	494476..494592 (-)	117	WP_009967548.1	type I toxin-antitoxin system toxin BsrG	-
C7M26_RS02945 (C7M26_00573)	-	494853..495212 (+)	360	WP_041338710.1	hypothetical protein	-
C7M26_RS02950 (C7M26_00574)	-	495256..495591 (-)	336	WP_041054825.1	hypothetical protein	-
C7M26_RS02955 (C7M26_00575)	yolD	495765..496097 (+)	333	WP_114168637.1	YolD-like family protein	-
C7M26_RS02960 (C7M26_00576)	uvrX	496090..497340 (+)	1251	WP_114168635.1	UV damage repair protein UvrX	-
C7M26_RS02965 (C7M26_00577)	-	497381..497557 (-)	177	WP_019712878.1	hypothetical protein	-
C7M26_RS02970 (C7M26_00578)	rapC	497547..498683 (-)	1137	WP_114168633.1	Rap family tetratricopeptide repeat protein	Regulator
C7M26_RS02975 (C7M26_00579)	-	498810..499061 (-)	252	WP_114168631.1	phage holin	-
C7M26_RS02980 (C7M26_00580)	-	499082..499474 (-)	393	WP_010328137.1	hypothetical protein	-
C7M26_RS02985 (C7M26_00581)	blyA	499590..500693 (-)	1104	WP_114168629.1	N-acetylmuramoyl-L-alanine amidase BlyA	-
C7M26_RS02990 (C7M26_00583)	yomE	501328..503262 (-)	1935	WP_114168627.1	phosphodiester glycosidase family protein	-

Sequence

Protein

• Length: 378 a.a.
• Molecular weight: 44819.07 Da
• Isoelectric Point: 5.1426

>NTDB_id=239858 C7M26_RS02970 WP_114168633.1 497547..498683(-) (rapC) [Bacillus subtilis strain SRCM102748]
MEQMISSSKVGVKINEWYKYIRLFSVPDSEILKAEVEEEIRHMKEDQDLLLYYSLMCFRHQLMLDYLEPKTLNEERPKIS
DLLEKIESSQTDLKGILEYYFNFFRGMYEFEQYEYLNAISFYKQAERKLSLVADEIERAEFHYKVAEIYYHMKQTHMSMH
HIVQAIDSYKAHENYTVRVIQCSFVIGLNYLDMDYPEKAIPHFKDALDKAREIDMSRLIGSSLYNLGLCSFTEEAYEKAS
EYFKEGIRVYQDNGYEHSNRILDILLMLTKTTFKMRNHSEGISWCAHGLSLSKNLNDAIMAKMFEFIHALYVDNDNEKLN
SILNYLELKSMLSDVEDLASDAAKYYNEKEDHKVAVAYYEKVLYARKQIQRGDCLYET

Nucleotide

• Length: 1137 bp

>NTDB_id=239858 C7M26_RS02970 WP_114168633.1 497547..498683(-) (rapC) [Bacillus subtilis strain SRCM102748]
TTGGAGCAGATGATCTCTTCTTCTAAAGTTGGAGTGAAAATAAATGAGTGGTATAAATACATAAGATTATTTAGTGTCCC
AGATTCGGAAATATTGAAAGCTGAGGTCGAGGAAGAAATAAGGCATATGAAAGAAGATCAAGATTTATTGCTGTACTATT
CTCTCATGTGTTTTCGCCATCAGCTGATGCTGGACTACCTTGAACCAAAAACATTGAACGAAGAACGACCTAAAATTTCA
GACTTATTAGAAAAGATCGAAAGTAGTCAAACTGATTTGAAAGGGATTCTTGAATATTATTTTAACTTTTTCCGGGGAAT
GTATGAATTTGAACAATACGAATATCTTAATGCCATAAGCTTCTATAAGCAAGCCGAGAGAAAATTATCACTTGTTGCAG
ATGAAATTGAAAGAGCAGAATTCCACTATAAAGTTGCAGAAATTTATTATCATATGAAGCAAACACATATGTCGATGCAC
CACATTGTTCAAGCAATCGATAGTTATAAAGCACATGAAAACTACACTGTAAGAGTTATTCAATGCTCATTTGTTATCGG
ACTGAACTATTTGGATATGGACTACCCTGAAAAAGCGATCCCTCATTTTAAAGATGCTCTAGATAAAGCAAGAGAAATCG
ATATGTCACGATTAATCGGATCATCTCTTTACAATCTCGGCTTATGTTCCTTTACTGAGGAAGCTTATGAAAAGGCATCT
GAGTACTTCAAGGAGGGCATTAGAGTATATCAGGATAATGGGTATGAACATTCAAATCGCATATTAGACATCTTACTTAT
GTTGACAAAAACCACTTTTAAAATGAGAAATCACTCCGAGGGAATTTCTTGGTGTGCACACGGTCTGTCTTTGTCCAAAA
ATTTAAACGATGCGATTATGGCAAAAATGTTTGAATTCATTCATGCCTTATATGTAGATAATGACAATGAAAAATTAAAT
TCAATTCTAAATTATTTAGAATTAAAGTCAATGCTTTCAGACGTGGAGGATTTAGCATCAGATGCAGCGAAGTATTACAA
TGAAAAAGAAGACCATAAAGTGGCTGTTGCTTATTATGAAAAAGTGCTTTATGCCCGTAAACAAATTCAGAGAGGGGATT
GTCTTTATGAAACTTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_8) (343-367)

• Tetratricopeptide repeat (TPR_8) (222-252)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	48.294	100	0.487
rapF	Bacillus subtilis subsp. subtilis str. 168	45.789	100	0.46