Detailed information
Bioinformatically predicted
Overview
| Name | comC | Type | Machinery gene |
| Locus tag | CGZ47_RS10820 | Genome accession | NZ_CP022475 |
| Coordinates | 237238..237945 (-) | Length | 235 a.a. |
| NCBI ID | WP_080563403.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain KG6 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 232238..242945
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ47_RS01255 (CGZ47_01255) | rpoC | 233524..237165 (+) | 3642 | WP_004270200.1 | DNA-directed RNA polymerase subunit beta' | - |
| CGZ47_RS10820 (CGZ47_01260) | comC | 237238..237945 (-) | 708 | WP_080563403.1 | prepilin peptidase | Machinery gene |
| CGZ47_RS01265 (CGZ47_01265) | rpsL | 238216..238629 (+) | 414 | WP_004270179.1 | 30S ribosomal protein S12 | - |
| CGZ47_RS01270 (CGZ47_01270) | rpsG | 238719..239189 (+) | 471 | WP_076786307.1 | 30S ribosomal protein S7 | - |
| CGZ47_RS01275 (CGZ47_01275) | fusA | 239281..241368 (+) | 2088 | WP_004270213.1 | elongation factor G | - |
| CGZ47_RS10865 (CGZ47_01280) | rsgA | 241709..241882 (-) | 174 | WP_089541899.1 | GTPase RsgA | - |
| CGZ47_RS01285 (CGZ47_01285) | rsgA | 241837..242163 (-) | 327 | WP_089541900.1 | GTPase RsgA | - |
| CGZ47_RS01290 (CGZ47_01290) | - | 242388..242939 (-) | 552 | WP_004270206.1 | cysteine hydrolase family protein | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 26572.90 Da Isoelectric Point: 6.9137
>NTDB_id=239854 CGZ47_RS10820 WP_080563403.1 237238..237945(-) (comC) [Latilactobacillus curvatus strain KG6]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIVNT
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIVNT
Nucleotide
Download Length: 708 bp
>NTDB_id=239854 CGZ47_RS10820 WP_080563403.1 237238..237945(-) (comC) [Latilactobacillus curvatus strain KG6]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGCGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGCGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATTATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comC | Latilactobacillus sakei subsp. sakei 23K |
50.661 |
96.596 |
0.489 |