Detailed information
Bioinformatically predicted
Overview
| Name | comFC | Type | Machinery gene |
| Locus tag | CG419_RS07770 | Genome accession | NZ_CP022474 |
| Coordinates | 1557541..1558071 (-) | Length | 176 a.a. |
| NCBI ID | WP_157776724.1 | Uniprot ID | - |
| Organism | Latilactobacillus curvatus strain MRS6 | ||
| Function | ssDNA transport into the cell (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1552541..1563071
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG419_RS07760 (CG419_07760) | secA | 1554279..1556642 (-) | 2364 | WP_004270228.1 | preprotein translocase subunit SecA | - |
| CG419_RS07765 (CG419_07765) | raiA | 1556870..1557415 (-) | 546 | WP_004270226.1 | ribosome-associated translation inhibitor RaiA | - |
| CG419_RS07770 (CG419_07770) | comFC | 1557541..1558071 (-) | 531 | WP_157776724.1 | ComF family protein | Machinery gene |
| CG419_RS07775 (CG419_07775) | comFA | 1558215..1559549 (-) | 1335 | WP_244185434.1 | DEAD/DEAH box helicase | Machinery gene |
| CG419_RS07780 (CG419_07780) | - | 1559606..1560268 (+) | 663 | WP_089556969.1 | YigZ family protein | - |
| CG419_RS07785 (CG419_07785) | - | 1560295..1561383 (-) | 1089 | WP_004270225.1 | MraY family glycosyltransferase | - |
| CG419_RS07790 (CG419_07790) | hemH | 1561493..1562434 (-) | 942 | WP_089556970.1 | ferrochelatase | - |
Sequence
Protein
Download Length: 176 a.a. Molecular weight: 20721.85 Da Isoelectric Point: 9.8850
>NTDB_id=239810 CG419_RS07770 WP_157776724.1 1557541..1558071(-) (comFC) [Latilactobacillus curvatus strain MRS6]
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNVLLSSKVQQLILLDDIYTTGRTLWHAQRCL
RKRYQTLPIHAITLVH
MTTQGVCPDCQRWQQLYPGEQFTNRALLTYNEPMQQYFQRYKGQGDYRLRHVFQRLIRENFPVQRQTAYIPVPTDPTHLQ
SRGFNPVVGLYEDCFPLTPLLQKLPTEKGQAQKNRAERLATPQFFKCAQNVLLSSKVQQLILLDDIYTTGRTLWHAQRCL
RKRYQTLPIHAITLVH
Nucleotide
Download Length: 531 bp
>NTDB_id=239810 CG419_RS07770 WP_157776724.1 1557541..1558071(-) (comFC) [Latilactobacillus curvatus strain MRS6]
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
GTTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGGCAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTTGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACGTGCTGTTGA
GTTCCAAGGTGCAGCAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCGGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
ATGACAACCCAGGGGGTGTGTCCGGATTGCCAGAGATGGCAGCAACTGTATCCAGGCGAACAATTTACTAATCGAGCGTT
GTTAACATACAACGAACCAATGCAACAGTATTTTCAACGCTATAAGGGGCAGGGGGATTATCGATTACGTCACGTATTTC
AACGGCTGATTCGAGAAAATTTTCCTGTGCAACGGCAAACGGCGTATATCCCAGTCCCGACTGATCCAACACATTTGCAA
AGCCGCGGATTCAATCCGGTGGTTGGCTTATACGAGGACTGTTTTCCACTGACCCCATTGTTGCAGAAGCTACCAACTGA
AAAAGGACAAGCACAAAAAAATCGTGCAGAGCGCTTAGCAACGCCGCAATTTTTTAAATGCGCGCAGAACGTGCTGTTGA
GTTCCAAGGTGCAGCAGTTAATTTTGTTGGATGATATTTATACCACTGGGCGCACGTTATGGCATGCTCAGCGGTGTCTC
CGCAAGCGATACCAAACGCTGCCAATTCACGCAATTACTTTAGTCCACTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comFC | Latilactobacillus sakei subsp. sakei 23K |
64.789 |
80.682 |
0.523 |