Detailed information NTG0239737

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CG015_RS13105
• Genome accession: NZ_CP022468
• Coordinates: 2826186..2827193 (-)
• Length: 335 a.a.
• NCBI ID: WP_017043195.1
• Uniprot ID: A0AAW8GSK0
• Organism: Vibrio anguillarum strain MHK3
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2821186..2832193

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG015_RS13080 (CG015_13090)	rraA	2821849..2822370 (-)	522	WP_129532797.1	ribonuclease E activity regulator RraA	-
CG015_RS13085 (CG015_13095)	-	2822447..2823364 (-)	918	WP_017043197.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CG015_RS13090 (CG015_13100)	hslU	2823487..2824818 (-)	1332	WP_129532798.1	HslU--HslV peptidase ATPase subunit	-
CG015_RS13095 (CG015_13105)	hslV	2824854..2825420 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CG015_RS13100 (CG015_13110)	-	2825541..2826083 (-)	543	WP_017043196.1	SPOR domain-containing protein	-
CG015_RS13105 (CG015_13115)	cytR	2826186..2827193 (-)	1008	WP_017043195.1	DNA-binding transcriptional regulator CytR	Regulator
CG015_RS13110 (CG015_13120)	priA	2827499..2829700 (-)	2202	WP_129532799.1	primosomal protein N'	-
CG015_RS13115 (CG015_13125)	rpmE	2829969..2830184 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CG015_RS13120 (CG015_13130)	-	2830390..2831667 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CG015_RS13125 (CG015_13135)	metJ	2831816..2832142 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36770.41 Da
• Isoelectric Point: 6.6397

>NTDB_id=239737 CG015_RS13105 WP_017043195.1 2826186..2827193(-) (cytR) [Vibrio anguillarum strain MHK3]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGITMNPNYCTYGDFTFEAGAKALRQLLALSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=239737 CG015_RS13105 WP_017043195.1 2826186..2827193(-) (cytR) [Vibrio anguillarum strain MHK3]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCTGTTTTGGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCTAAAACCATTGTCGCTATCGTGCCTGATATTTGTGACCCTTACTTCACAGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTGTTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAGGCCGATGGCATGTTGTTGCTGGGAACTGATTTGCCGTTTGATGTTAGTAAGCCGG
AGCAAAAAAACCTGCCACCTATGGTCATGGCATGTGAATTTGCGCCAGAACTTGAGTTGCCGACGGTACATATTGATAAC
CTCACTTCAGCGTTTGAAGCGGTGAACTATTTGACACAGCTCGGGCACAAACGCATCGCGCAAATATCGGGGCCAGCAGA
GGCCACGCTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCTTTACGCCGCGCAGGAATTACCATGAACCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCTGGGGCTAAAGCACTGCGCCAATTATTGGCGTTATCTGAGCCACCCACAGCC
ATTTTTAGTCATAATGACAGTATGGCTATCGGTGTCATTAAGGAAGCCAAAAAATTGGGTTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATCTCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGCGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCACCTCCTCGCTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	92.169	99.104	0.913
cytR	Vibrio parahaemolyticus RIMD 2210633	87.387	99.403	0.869