Detailed information NTG0239717

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: CG015_RS03870
• Genome accession: NZ_CP022468
• Coordinates: 810886..814278 (-)
• Length: 1130 a.a.
• NCBI ID: WP_129532819.1
• Uniprot ID: -
• Organism: Vibrio anguillarum strain MHK3
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 805886..819278

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG015_RS03855 (CG015_03845)	-	806290..807315 (-)	1026	WP_013857641.1	ABC transporter permease	-
CG015_RS03860 (CG015_03850)	-	807318..808304 (-)	987	WP_013857640.1	ABC transporter permease	-
CG015_RS03865 (CG015_03855)	-	808471..810141 (-)	1671	WP_013857639.1	ABC transporter substrate-binding protein	-
CG015_RS03870 (CG015_03860)	chiS	810886..814278 (-)	3393	WP_129532819.1	ATP-binding protein	Regulator
CG015_RS03875 (CG015_03865)	rsmC	814478..815521 (-)	1044	WP_129532259.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
CG015_RS03880 (CG015_03870)	-	815605..816690 (-)	1086	WP_017049774.1	AI-2E family transporter	-
CG015_RS03885 (CG015_03875)	hemL	816968..818263 (-)	1296	WP_026028237.1	glutamate-1-semialdehyde 2,1-aminomutase	-
CG015_RS03890 (CG015_03880)	erpA	818586..818927 (+)	342	WP_026027518.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127854.56 Da
• Isoelectric Point: 6.2690

>NTDB_id=239717 CG015_RS03870 WP_129532819.1 810886..814278(-) (chiS) [Vibrio anguillarum strain MHK3]
MFRFSRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHTKDLQEQSTSHLLSVRDTKQQQVLDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGLDIDQAREHAQQRYIPGSGDQIKTSILPQSSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGDVVYSVYKHDNYGTNLLTGKYKDSNLGKTFRQLEQQVGEQRKINEEYTPVIISDFSQQEGQSVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLVADTNATSQIRTLLVGQDHHSRILSYTQQEIETSQKVINLALSGLSAVGTYTNTLNEK
TIAAYAPVANKNINWALVVEIPEKEAYARVHQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
NVINTDRKDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQLIRKQNDELHLANKLKDEFLATTSHELRTPLHGMVG
IAEALISGSSGTITADHRYQLGIIISSGQRLTNLVDDLLDYHKMRYGSLDIKQCAVDLSGATRLVLELSNHLLNKKPIRV
INQIPDECIWVSADPQRLEQVLYNLVGNAIKYTTEGKIVISANVVDDKIRVQVVDTGQGIPAEQLEHIFEPLIQAGQDSS
RYRQGAGLGLSISRQLIELMQGTLYVSSQPMVGTTFSFTLPLASKAEIESTSYMETGHFQSPTISDIELPEMHSLPENKE
GPVLLIADDEPVNLRVLDSFLRLEGYQVRTAKDGNEVISAVEKEKPELLLLDIMMPGLSGYQVCEKLRETYDHAELPIIM
LTALNQTDDRVRGFAAGANDYLSKPFNKQELAARITAHLTASKAEQRRIENNQLQQELKHRAMVEASLLETQGRLLEQLE
SAPEAIICIRDDHKIRFANEAAARLFKRSQEQLKRSNAEELIAPKYLVVEQEHYCGNIDIYVEDTRQHMSADVLRLPDGS
GLQAMYIFNVGGNINAARINNLETAIEALSSYAFEGDKEKLQLLKELGGEFTRIADKVSGESQSKQDLMREVLVEAMTSA
LDYWERVSNQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEHGPERSHIEAQRD
KLQKLLTSSL

Nucleotide

• Length: 3393 bp

>NTDB_id=239717 CG015_RS03870 WP_129532819.1 810886..814278(-) (chiS) [Vibrio anguillarum strain MHK3]
ATGTTTAGGTTCTCTCGTAAGCAAAAATTTAAGCGCCTGCAAAATACTCTTATGCTGGCTTTTCTCGTTTTGAGCATCAC
GCCTTTAACTGTGACTGCCATTTTTTTTCTGCAATCACACACTAAAGATCTTCAAGAACAAAGCACGTCTCACTTATTGT
CAGTCAGAGACACTAAGCAACAGCAAGTTCTCGATTACCTCACGGCCAAAGAATCAGAAGTGATGGGGTTTGTCCGTTCA
GAGTTAGCTTATGCTAGTGGAGGGCGCTTTTACGGCTTAGTCAATGCGTTCCAAAGACTTGGTCTGGATATTGATCAAGC
TCGTGAGCATGCCCAGCAGCGTTATATTCCTGGCTCTGGTGATCAGATAAAAACGTCAATATTGCCACAATCGAGCAGCT
ATGTAGGCAGTGAACGGTATCGCTTACTGCACAAACGCTATCATTGGGCGTATTTAGAACTGCTTAAACGTTCTGATTTT
GACGATATTTTACTGGTGGATCTCGATGGTGATGTCGTTTATTCCGTTTATAAGCACGACAACTATGGGACGAATTTACT
GACCGGAAAATACAAAGATAGCAATCTGGGTAAAACATTCCGCCAGTTAGAGCAACAAGTTGGCGAACAACGAAAAATCA
ATGAAGAATATACACCAGTCATTATTTCTGATTTTTCACAACAAGAAGGGCAATCAGTTGCTTGGCTTGGCGCGCCCATT
ATTCAACAGGGCTACCTGCACAGCTACGCCATGTTCCGCCTACCAAATAATGGCATCACAAAGCTCGTGGCTGACACCAA
TGCGACATCGCAAATAAGAACTTTACTCGTCGGGCAAGATCATCATTCTCGAATACTCTCTTACACGCAGCAAGAAATCG
AGACTAGTCAAAAAGTGATCAATCTTGCGCTTTCTGGATTGAGTGCCGTTGGTACTTACACTAATACATTGAATGAAAAA
ACCATTGCCGCCTATGCACCTGTTGCAAACAAAAATATCAATTGGGCCTTGGTCGTAGAGATACCAGAAAAAGAGGCTTA
TGCGCGAGTTCATCAGCTTGAGAAGTTGTTTATTTTCGCCATGCTAACCGCGATTATTTTAGTCGTCATCGCTTCACATT
ATCTCTCTAATTTTATTACCTCTCCCCTACTGAAGCTGACTTGGGCGGCAGAAAAAGTCTCAGCTGGGGATTTAGATGAA
AATGTTATCAATACCGATCGTAAAGATGAGATTGGTCGACTCGCAGTGAGTTTTGAGCGTATGCAGCGTTCAATCCGAGA
AAAAATGCAGCTGATTAAGGCGCAAAATAAAGAGCTCGAAAGCAACATTCAATTAATCCGCAAACAGAACGATGAGTTGC
ATCTCGCTAACAAACTAAAAGATGAATTCCTAGCCACAACGTCACATGAATTAAGAACACCGCTGCACGGTATGGTCGGT
ATTGCAGAAGCACTGATCTCTGGGTCAAGTGGAACTATCACCGCCGATCACCGTTATCAATTGGGCATAATCATCAGCAG
TGGACAACGGCTGACAAACTTAGTCGATGACTTACTCGATTACCATAAGATGCGCTATGGCAGCTTGGATATCAAACAGT
GTGCTGTTGATCTATCCGGCGCAACACGCTTAGTGTTAGAGCTGTCTAACCATCTACTCAACAAAAAGCCCATTCGCGTA
ATAAACCAAATCCCTGATGAATGCATTTGGGTCTCTGCCGATCCACAACGATTAGAGCAAGTGCTTTATAACCTTGTAGG
AAACGCCATTAAATATACGACTGAAGGGAAAATTGTCATTTCAGCCAATGTGGTTGATGACAAGATTCGTGTCCAAGTTG
TCGATACGGGACAAGGCATTCCTGCTGAACAACTTGAACACATCTTTGAACCACTGATTCAAGCAGGGCAAGATTCCAGC
CGTTATCGACAAGGCGCTGGTTTAGGTCTTTCGATCAGCCGTCAATTGATCGAATTGATGCAAGGAACGCTTTATGTCAG
TAGCCAACCTATGGTCGGTACAACATTCAGCTTTACCTTGCCATTAGCATCAAAAGCGGAAATTGAGTCGACAAGCTATA
TGGAAACCGGCCATTTCCAATCTCCGACCATTTCAGACATTGAACTGCCTGAAATGCATTCACTGCCTGAAAATAAAGAA
GGCCCAGTGCTACTGATAGCCGATGATGAACCCGTCAATCTGCGTGTCCTAGACAGCTTCTTACGTTTAGAAGGCTATCA
AGTCCGCACCGCTAAAGATGGCAATGAAGTCATTAGCGCGGTCGAAAAAGAAAAGCCGGAACTTCTACTGCTCGACATTA
TGATGCCAGGATTAAGCGGCTACCAAGTCTGTGAAAAGTTAAGAGAAACATACGATCATGCCGAGCTACCTATCATTATG
TTGACGGCATTAAATCAAACTGACGATAGAGTTCGGGGTTTTGCAGCGGGAGCGAACGATTACTTATCGAAACCTTTTAA
TAAGCAAGAGCTCGCTGCACGTATTACGGCGCATTTAACGGCCAGTAAAGCTGAACAAAGACGTATTGAGAACAACCAAC
TGCAACAAGAGCTGAAGCATAGAGCAATGGTAGAGGCCAGTTTATTGGAAACCCAAGGCCGTCTACTAGAGCAGCTCGAA
TCCGCTCCTGAGGCCATTATTTGCATTCGAGACGATCATAAAATCCGCTTTGCGAACGAAGCGGCTGCTCGGTTATTTAA
GCGCAGCCAAGAACAACTAAAGCGCTCAAATGCGGAAGAACTCATCGCCCCCAAATACTTAGTCGTCGAGCAAGAGCATT
ACTGCGGTAATATCGATATCTATGTCGAAGATACACGTCAGCATATGTCTGCTGATGTGTTACGACTACCGGATGGCTCT
GGGTTGCAGGCTATGTACATCTTTAACGTGGGTGGAAACATCAATGCAGCGCGCATCAATAACCTTGAAACCGCTATTGA
AGCGCTATCCAGTTACGCATTTGAAGGCGATAAAGAAAAACTGCAACTGCTCAAAGAACTCGGTGGCGAGTTCACACGTA
TCGCCGACAAAGTATCGGGAGAGAGTCAATCTAAGCAAGATTTAATGCGCGAAGTACTGGTTGAAGCAATGACCAGTGCT
TTAGATTACTGGGAACGGGTCAGTAACCAAAGCAAGTTTACCTTTGCAGAGCAGAGTGGGCTATGGCGAGTGTATCTCGA
TAGAAGCACATTACAGACTCGGACACTAGACAAGTACTTACGTATCGAGACACTGCCTAAAACACCTCGCTGGCGTACCG
TTCTTAATTCGTTAGATTACATTCTTGATCATTGTCAGGAGCACGGCCCTGAACGCTCTCACATCGAAGCGCAGCGCGAT
AAATTGCAAAAGCTACTGACCTCATCACTCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (725-835)

• PAS fold (PAS) (876-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• HAMP domain (HAMP) (375-427)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	81.56	99.823	0.814