Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C7M23_RS03855 Genome accession   NZ_CP028209
Coordinates   728920..729714 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SRCM102745     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 723920..734714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M23_RS03835 (C7M23_00755) walR 724162..724869 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  C7M23_RS03840 (C7M23_00756) walK 724877..726712 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  C7M23_RS03845 (C7M23_00757) walH 726702..728069 (+) 1368 WP_160243167.1 WalRK two-component regulatory system regulator WalH -
  C7M23_RS03850 (C7M23_00758) walI 728056..728898 (+) 843 WP_160243169.1 WalRK two-component regulatory system regulator WalI -
  C7M23_RS03855 (C7M23_00759) vicX 728920..729714 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C7M23_RS03860 (C7M23_00760) htrA 729796..730998 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  C7M23_RS03865 - 731019..731148 (+) 130 Protein_714 hypothetical protein -
  C7M23_RS03870 (C7M23_00761) - 731145..731645 (-) 501 WP_015250813.1 PepSY domain-containing protein -
  C7M23_RS03875 (C7M23_00762) - 731806..732705 (-) 900 WP_131228296.1 PepSY domain-containing protein -
  C7M23_RS03880 (C7M23_00763) - 732917..733600 (+) 684 WP_038428106.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=239708 C7M23_RS03855 WP_003226939.1 728920..729714(+) (vicX) [Bacillus subtilis strain SRCM102745]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=239708 C7M23_RS03855 WP_003226939.1 728920..729714(+) (vicX) [Bacillus subtilis strain SRCM102745]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCCGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53