Detailed information NTG0239694

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M23_RS01790
• Genome accession: NZ_CP028209
• Coordinates: 359378..360499 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102745
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 354378..365499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M23_RS01770 (C7M23_00352)	znuC	354888..355583 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
C7M23_RS01775 (C7M23_00353)	znuA	355638..356597 (-)	960	WP_029317219.1	metal ABC transporter substrate-binding protein	-
C7M23_RS01780 (C7M23_00354)	ycdG	356785..358470 (-)	1686	WP_113713019.1	alpha-glucosidase	-
C7M23_RS01785 (C7M23_00355)	ycdF	358495..359271 (-)	777	WP_029726977.1	SDR family oxidoreductase	-
C7M23_RS01790 (C7M23_00356)	rapF	359378..360499 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C7M23_RS01795 (C7M23_00357)	cwlK	360622..361125 (+)	504	WP_069322342.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M23_RS01800 (C7M23_00358)	ycdC	361133..362494 (-)	1362	WP_088327401.1	YcdB/YcdC domain-containing protein	-
C7M23_RS01805 (C7M23_00359)	ycdB	362681..364102 (-)	1422	WP_131227090.1	YcdB/YcdC domain-containing protein	-
C7M23_RS01810	-	364276..364407 (+)	132	WP_003246334.1	hypothetical protein	-
C7M23_RS01815 (C7M23_00360)	ycdA	364430..365494 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=239694 C7M23_RS01790 WP_015715201.1 359378..360499(-) (rapF) [Bacillus subtilis strain SRCM102745]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=239694 C7M23_RS01790 WP_015715201.1 359378..360499(-) (rapF) [Bacillus subtilis strain SRCM102745]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATTTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAACTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405