Detailed information NTG0239682

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M23_RS00610
• Genome accession: NZ_CP028209
• Coordinates: 113164..114339 (-)
• Length: 391 a.a.
• NCBI ID: WP_160243091.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102745
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 108164..119339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M23_RS00590 (C7M23_00119)	-	109361..111157 (+)	1797	WP_160243085.1	T7SS effector LXG polymorphic toxin	-
C7M23_RS00595 (C7M23_00120)	-	111170..111628 (+)	459	WP_160243087.1	SMI1/KNR4 family protein	-
C7M23_RS00600 (C7M23_00121)	-	111859..113001 (-)	1143	WP_160243089.1	FRG domain-containing protein	-
C7M23_RS00605 (C7M23_00122)	phrI	113088..113207 (-)	120	WP_076983188.1	phosphatase RapI inhibitor PhrI	-
C7M23_RS00610 (C7M23_00123)	rapF	113164..114339 (-)	1176	WP_160243091.1	response regulator aspartate phosphatase RapI	Regulator
C7M23_RS00615 (C7M23_00124)	-	114593..116500 (-)	1908	WP_160243093.1	ATP-dependent helicase	-
C7M23_RS00620 (C7M23_00125)	-	116487..118484 (-)	1998	WP_311766272.1	AAA family ATPase	-
C7M23_RS00625 (C7M23_00126)	-	118681..119073 (-)	393	WP_201757452.1	cystatin-like fold lipoprotein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 46586.01 Da
• Isoelectric Point: 4.8598

>NTDB_id=239682 C7M23_RS00610 WP_160243091.1 113164..114339(-) (rapF) [Bacillus subtilis strain SRCM102745]
MRGVFLDKDKIPYDLVTKKLNEWYTSIKNDQVEQAEIIKTEVEKELLNMEENQDALLYYQLLEFRHEIMLSYMKSKEIED
LNNAYETIKEIEKQGQLTGMLEYYFYFFKGMYEFRRKELISAISAYRIAESKLSEVEDEIEKAEFFFKVSYVYYYMKQTY
FSMNYANRALKIFREYEEYAVQTVRCQFIVAGNLIDSLEYERALEQFLKSLEISKESNIEHLIAMSHMNIGICYDELKEY
QRASRHLISALEIFEKSKHSFLTKTLFTLTYVEAKQQNYDVALTYFRKGRFIADKSDDKEYSAKFKILEGLFFSDGETQL
IKDAFSYLASRKMFADVENFSIEVADYFHEQGNLMLSNEYYRMSIEARRKIKKGEIIDENQPDSIGSSDFK

Nucleotide

• Length: 1176 bp

>NTDB_id=239682 C7M23_RS00610 WP_160243091.1 113164..114339(-) (rapF) [Bacillus subtilis strain SRCM102745]
TTGCGGGGTGTTTTCTTAGATAAAGATAAAATTCCGTACGACTTAGTCACGAAAAAGTTAAATGAATGGTATACATCAAT
AAAAAATGATCAAGTTGAGCAAGCCGAGATTATAAAAACAGAAGTAGAGAAAGAATTGTTAAACATGGAAGAAAATCAAG
ATGCCTTGTTATATTATCAACTATTAGAATTTAGACACGAGATTATGCTGAGTTATATGAAATCTAAGGAAATAGAAGAT
CTCAATAATGCTTATGAGACTATAAAAGAAATTGAGAAGCAAGGGCAATTAACTGGCATGTTGGAATACTATTTTTACTT
TTTTAAGGGTATGTACGAGTTTAGGCGTAAAGAATTAATTTCAGCGATAAGTGCTTATCGAATAGCTGAATCAAAGTTGT
CAGAAGTTGAGGATGAAATAGAGAAAGCAGAGTTTTTTTTTAAAGTGTCCTATGTATATTATTATATGAAACAAACATAC
TTCTCCATGAATTATGCAAATCGTGCACTCAAAATATTTAGAGAGTATGAAGAATATGCTGTCCAGACTGTGCGTTGTCA
ATTTATTGTAGCAGGAAACTTGATCGATTCTTTGGAATATGAAAGAGCCTTGGAACAGTTTTTGAAATCTTTGGAGATTT
CCAAGGAAAGTAACATAGAGCATTTAATTGCAATGTCACACATGAATATTGGGATTTGTTATGATGAATTGAAAGAATAT
CAAAGAGCTTCACGACATTTAATCTCAGCGCTAGAAATTTTTGAAAAATCAAAACATAGTTTCCTAACAAAGACTTTATT
CACTTTAACTTACGTTGAAGCAAAACAACAAAATTATGATGTCGCTTTGACATACTTTAGGAAAGGGCGATTCATTGCCG
ATAAAAGTGATGATAAGGAATACTCAGCGAAATTCAAAATATTAGAGGGTTTATTTTTTTCAGATGGTGAGACCCAGTTA
ATAAAGGATGCATTTTCATATCTGGCTTCGAGAAAAATGTTTGCTGATGTTGAAAATTTTTCGATTGAAGTCGCTGATTA
TTTTCACGAACAAGGAAATTTAATGCTCTCTAATGAATATTATCGTATGAGTATTGAAGCAAGACGAAAAATTAAAAAAG
GGGAGATTATTGATGAAAATCAGCCGGATTCTATTGGCAGCAGTGATTTTAAGTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (10-70)

• Tetratricopeptide repeat (TPR_12) (199-256)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	38.798	93.606	0.363
rapC	Bacillus subtilis subsp. subtilis str. 168	38.378	94.629	0.363