Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M17_RS21400 Genome accession   NZ_CP028202
Coordinates   4103212..4103907 (+) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102754     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4098212..4108907
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS21375 (C7M17_04221) ytrB 4098240..4099118 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  C7M17_RS21380 (C7M17_04222) ytrC 4099112..4100098 (+) 987 WP_003246175.1 ABC transporter permease YtrC -
  C7M17_RS21385 (C7M17_04223) ytrD 4100128..4101105 (+) 978 WP_080529695.1 ABC transporter permease YtrD -
  C7M17_RS21390 (C7M17_04224) ytrE 4101120..4101815 (+) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  C7M17_RS21395 (C7M17_04225) ytrF 4101805..4103115 (+) 1311 WP_015251399.1 ABC transporter permease YtrF -
  C7M17_RS21400 (C7M17_04226) braR 4103212..4103907 (+) 696 WP_033884849.1 two-component response regulator BceR Regulator
  C7M17_RS21405 (C7M17_04227) bceS 4103900..4104904 (+) 1005 WP_122895732.1 two-component sensor histidine kinase BceS -
  C7M17_RS21410 (C7M17_04228) bceA 4105006..4105767 (+) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M17_RS21415 (C7M17_04229) bceB 4105757..4107697 (+) 1941 WP_080529693.1 bacitracin ABC transporter permease BceB -
  C7M17_RS21420 (C7M17_04230) yttA 4107734..4108480 (-) 747 WP_122895733.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=239675 C7M17_RS21400 WP_033884849.1 4103212..4103907(+) (braR) [Bacillus subtilis strain SRCM102754]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=239675 C7M17_RS21400 WP_033884849.1 4103212..4103907(+) (braR) [Bacillus subtilis strain SRCM102754]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTTCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377