Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   C7M17_RS20585 Genome accession   NZ_CP028202
Coordinates   3958782..3959651 (+) Length   289 a.a.
NCBI ID   WP_015714626.1    Uniprot ID   C0JBL3
Organism   Bacillus subtilis strain SRCM102754     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3953782..3964651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS20555 (C7M17_04058) pncA 3954246..3954797 (+) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -
  C7M17_RS20560 (C7M17_04059) pncB 3954813..3956285 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M17_RS20565 (C7M17_04060) pdeH 3956422..3957651 (+) 1230 WP_014477835.1 cyclic di-GMP phosphodiesterase -
  C7M17_RS20570 (C7M17_04061) - 3957627..3957995 (-) 369 WP_014477834.1 hypothetical protein -
  C7M17_RS20575 - 3958110..3958235 (-) 126 WP_141770195.1 hypothetical protein -
  C7M17_RS20580 (C7M17_04062) degQ 3958457..3958597 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M17_RS20585 (C7M17_04063) comQ 3958782..3959651 (+) 870 WP_015714626.1 polyprenyl synthetase family protein Regulator
  C7M17_RS20590 (C7M17_04064) comX 3959648..3959869 (+) 222 WP_014114983.1 competence pheromone ComX -
  C7M17_RS20595 (C7M17_04065) comP 3959885..3962197 (+) 2313 WP_068947635.1 histidine kinase Regulator
  C7M17_RS20600 (C7M17_04066) comA 3962278..3962922 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M17_RS20605 (C7M17_04067) yuxO 3962941..3963321 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M17_RS20610 (C7M17_04068) mnhG 3963362..3963736 (-) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  C7M17_RS20615 (C7M17_04069) mrpF 3963720..3964004 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M17_RS20620 (C7M17_04070) mrpE 3964004..3964480 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 33019.53 Da        Isoelectric Point: 4.6894

>NTDB_id=239672 C7M17_RS20585 WP_015714626.1 3958782..3959651(+) (comQ) [Bacillus subtilis strain SRCM102754]
MKEIVDENISNEDLKTKLISFIEEKKQFSFAELAYHHYIAFDGKDVTAIELLASGIELLILSADIFDDIEDKDNLQASWM
KIDPSIVINAATTLYTLSLQVISLVSNNPQLLSLTLQYSLQSLQGQHADLNVKISSESEYIEMIKLKSGSLVTLPSVLGV
YLATGEINETVEEYSLYLGIVEQIANDHHGLYYPDNNDIKTRHNLAFYYLKNKYNQSSIDLLNFYAQENNQINNMDELKK
RLQGSGVIQYLNVIKNIALENFKESFKKLRLDEQRKNKLLDQLLRGNIN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=239672 C7M17_RS20585 WP_015714626.1 3958782..3959651(+) (comQ) [Bacillus subtilis strain SRCM102754]
ATGAAGGAGATTGTAGATGAAAATATTTCAAATGAAGACTTAAAAACAAAACTTATTTCTTTTATTGAAGAAAAAAAACA
ATTTTCATTTGCAGAATTAGCTTATCACCATTACATAGCATTTGACGGAAAAGATGTTACAGCAATTGAGTTGTTGGCTT
CTGGTATAGAACTTTTAATTTTATCTGCTGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAAATAGATCCTTCGATAGTGATTAACGCAGCTACTACACTTTATACATTAAGTTTGCAAGTGATAAGTTTAGTTTCAAA
CAATCCGCAACTTCTAAGTCTGACTTTACAATATTCACTTCAATCTTTACAAGGGCAACATGCAGATTTAAATGTAAAAA
TCTCTTCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCAGGTTCTCTTGTAACATTGCCTAGTGTTCTTGGTGTA
TATTTGGCAACTGGAGAAATTAATGAAACAGTCGAGGAGTATTCACTTTATTTGGGTATAGTCGAGCAAATTGCGAATGA
TCACCATGGGCTATATTATCCTGACAATAATGACATAAAAACTAGACACAATCTTGCCTTCTACTATCTAAAAAATAAAT
ATAACCAATCATCGATTGACTTATTAAATTTTTATGCGCAAGAAAATAATCAGATAAATAACATGGATGAATTGAAAAAG
AGGTTACAAGGATCAGGTGTAATCCAATACCTGAATGTTATTAAAAATATAGCACTGGAAAATTTTAAAGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAGAATAAACTACTTGATCAATTATTAAGGGGGAATATAAATTGA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0JBL3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

43.056

99.654

0.429