Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M17_RS19040 Genome accession   NZ_CP028202
Coordinates   3649639..3650352 (+) Length   237 a.a.
NCBI ID   WP_122894756.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102754     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3644639..3655352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS19005 (C7M17_03751) rppI 3644885..3645361 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M17_RS19010 (C7M17_03752) rapZ 3645386..3646273 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C7M17_RS19015 (C7M17_03753) mgfK 3646275..3647228 (+) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  C7M17_RS19020 (C7M17_03754) whiA 3647251..3648201 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M17_RS19025 (C7M17_03755) crh 3648225..3648482 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M17_RS19030 (C7M17_03756) yvcN 3648483..3649247 (+) 765 WP_122894757.1 arylamine N-acetyltransferase -
  C7M17_RS19035 (C7M17_03757) - 3649283..3649492 (-) 210 WP_021480676.1 hypothetical protein -
  C7M17_RS19040 (C7M17_03758) braR 3649639..3650352 (+) 714 WP_122894756.1 two-component system response regulator PsdR Regulator
  C7M17_RS19045 (C7M17_03759) psdS 3650346..3651416 (+) 1071 WP_122894755.1 two-component sensor histidine kinase PsdS -
  C7M17_RS19050 (C7M17_03760) psdA 3651499..3652278 (+) 780 WP_122894754.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M17_RS19055 (C7M17_03761) psdB 3652253..3654193 (+) 1941 WP_160245498.1 lantibiotic ABC transporter permease PsdB -
  C7M17_RS19060 (C7M17_03762) ghrB 3654231..3655208 (-) 978 WP_122894752.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27613.52 Da        Isoelectric Point: 4.6219

>NTDB_id=239665 C7M17_RS19040 WP_122894756.1 3649639..3650352(+) (braR) [Bacillus subtilis strain SRCM102754]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGELTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=239665 C7M17_RS19040 WP_122894756.1 3649639..3650352(+) (braR) [Bacillus subtilis strain SRCM102754]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAGAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGACCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGAGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCGTCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCCGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.089

94.515

0.426