Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M17_RS16445 Genome accession   NZ_CP028202
Coordinates   3132434..3133123 (+) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain SRCM102754     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3127434..3138123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS16425 (C7M17_03243) iolG 3128588..3129622 (+) 1035 WP_160245440.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  C7M17_RS16430 (C7M17_03244) iolH 3129642..3130511 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  C7M17_RS16435 (C7M17_03245) iolI 3130597..3131433 (+) 837 WP_032730291.1 2-keto-myo-inositol isomerase -
  C7M17_RS16440 (C7M17_03246) iolJ 3131454..3132326 (+) 873 WP_160245441.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C7M17_RS16445 (C7M17_03247) braR 3132434..3133123 (+) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  C7M17_RS16450 (C7M17_03248) yxdK 3133120..3134097 (+) 978 WP_024572300.1 two-component system sensor histidine kinase YxdK -
  C7M17_RS16455 (C7M17_03249) yxdL 3134241..3135014 (+) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  C7M17_RS16460 (C7M17_03250) yxdM 3134989..3136857 (+) 1869 WP_122895695.1 ABC transporter permease YxdM -
  C7M17_RS16465 (C7M17_03251) yxeA 3136871..3137218 (+) 348 WP_024572303.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=239650 C7M17_RS16445 WP_003243527.1 3132434..3133123(+) (braR) [Bacillus subtilis strain SRCM102754]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=239650 C7M17_RS16445 WP_003243527.1 3132434..3133123(+) (braR) [Bacillus subtilis strain SRCM102754]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406