Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C7M17_RS16110 Genome accession   NZ_CP028202
Coordinates   3064602..3065396 (+) Length   264 a.a.
NCBI ID   WP_003226939.1    Uniprot ID   A0ABU0V6L5
Organism   Bacillus subtilis strain SRCM102754     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3059602..3070396
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS16090 (C7M17_03180) walR 3059844..3060551 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  C7M17_RS16095 (C7M17_03181) walK 3060559..3062394 (+) 1836 WP_160245417.1 cell wall metabolism sensor histidine kinase WalK -
  C7M17_RS16100 (C7M17_03182) walH 3062384..3063751 (+) 1368 WP_047183604.1 WalRK two-component regulatory system regulator WalH -
  C7M17_RS16105 (C7M17_03183) walI 3063738..3064580 (+) 843 WP_064671690.1 WalRK two-component regulatory system regulator WalI -
  C7M17_RS16110 (C7M17_03184) vicX 3064602..3065396 (+) 795 WP_003226939.1 MBL fold metallo-hydrolase Regulator
  C7M17_RS16115 (C7M17_03185) htrA 3065478..3066680 (+) 1203 WP_015250812.1 serine protease HtrC Regulator
  C7M17_RS16120 - 3066701..3066827 (+) 127 Protein_3159 hypothetical protein -
  C7M17_RS16125 - 3066855..3067007 (+) 153 Protein_3160 ATP-binding protein -
  C7M17_RS16130 (C7M17_03186) rocR 3066989..3068374 (-) 1386 WP_029318546.1 arginine utilization regulatory protein RocR -
  C7M17_RS16135 (C7M17_03187) rocD 3068612..3069817 (+) 1206 WP_024571526.1 ornithine aminotransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29283.28 Da        Isoelectric Point: 5.8036

>NTDB_id=239648 C7M17_RS16110 WP_003226939.1 3064602..3065396(+) (vicX) [Bacillus subtilis strain SRCM102754]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=239648 C7M17_RS16110 WP_003226939.1 3064602..3065396(+) (vicX) [Bacillus subtilis strain SRCM102754]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGTGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCGGAACCGATGTTTTATGTGTTCC
ATTATAACGGCCGAAAGCTCGCATTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGTGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTACAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53

Multiple sequence alignment