Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C7M17_RS15510 Genome accession   NZ_CP028202
Coordinates   2956775..2957602 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain SRCM102754     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2951775..2962602
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M17_RS15485 (C7M17_03059) abrB 2954121..2954411 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  C7M17_RS15490 (C7M17_03060) rsmI 2954460..2955338 (-) 879 WP_122895841.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C7M17_RS15495 (C7M17_03061) yazA 2955313..2955612 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  C7M17_RS15500 (C7M17_03062) trmNF 2955599..2956342 (-) 744 WP_122895842.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C7M17_RS15505 (C7M17_03063) yabA 2956401..2956760 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  C7M17_RS15510 (C7M17_03064) yaaT 2956775..2957602 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  C7M17_RS15515 (C7M17_03065) holB 2957605..2958594 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  C7M17_RS15520 (C7M17_03066) yaaR 2958606..2959046 (-) 441 WP_009966249.1 YaaR family protein -
  C7M17_RS15525 (C7M17_03067) darA 2959059..2959388 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C7M17_RS15530 (C7M17_03068) tmk 2959462..2960100 (-) 639 WP_122895843.1 dTMP kinase -
  C7M17_RS15535 (C7M17_03069) efpO 2960097..2961539 (-) 1443 WP_122895844.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=239642 C7M17_RS15510 WP_003226767.1 2956775..2957602(-) (yaaT) [Bacillus subtilis strain SRCM102754]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=239642 C7M17_RS15510 WP_003226767.1 2956775..2957602(-) (yaaT) [Bacillus subtilis strain SRCM102754]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTGATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996