Detailed information NTG0239634

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M17_RS14095
• Genome accession: NZ_CP028202
• Coordinates: 2703610..2704731 (-)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102754
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2698610..2709731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M17_RS14075 (C7M17_02784)	znuC	2699118..2699813 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
C7M17_RS14080 (C7M17_02785)	znuA	2699869..2700828 (-)	960	WP_086343416.1	metal ABC transporter substrate-binding protein	-
C7M17_RS14085 (C7M17_02786)	ycdG	2701016..2702701 (-)	1686	WP_133953739.1	alpha-glucosidase	-
C7M17_RS14090 (C7M17_02787)	ycdF	2702726..2703502 (-)	777	WP_003234739.1	SDR family oxidoreductase	-
C7M17_RS14095 (C7M17_02788)	rapF	2703610..2704731 (-)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
C7M17_RS14100 (C7M17_02789)	cwlK	2704854..2705357 (+)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M17_RS14105 (C7M17_02790)	ycdC	2705365..2706726 (-)	1362	WP_160245581.1	YcdB/YcdC domain-containing protein	-
C7M17_RS14110 (C7M17_02791)	ycdB	2706913..2708334 (-)	1422	WP_160245389.1	YcdB/YcdC domain-containing protein	-
C7M17_RS14115	-	2708508..2708639 (+)	132	WP_003246334.1	hypothetical protein	-
C7M17_RS14120 (C7M17_02792)	ycdA	2708662..2709726 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=239634 C7M17_RS14095 WP_015715201.1 2703610..2704731(-) (rapF) [Bacillus subtilis strain SRCM102754]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=239634 C7M17_RS14095 WP_015715201.1 2703610..2704731(-) (rapF) [Bacillus subtilis strain SRCM102754]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAACTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405