Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   CGZ63_RS20670 Genome accession   NZ_CP022445
Coordinates   3928660..3929094 (-) Length   144 a.a.
NCBI ID   WP_000811494.1    Uniprot ID   A0A9Q6M5X1
Organism   Bacillus cereus C1L     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 3923660..3934094
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ63_RS20655 - 3924836..3925393 (+) 558 WP_089607607.1 PadR family transcriptional regulator -
  CGZ63_RS20660 metE 3925907..3928195 (+) 2289 WP_089607608.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  CGZ63_RS20665 comJ 3928234..3928623 (-) 390 WP_000424030.1 competence protein ComJ -
  CGZ63_RS20670 nucA/comI 3928660..3929094 (-) 435 WP_000811494.1 DNA-entry nuclease Machinery gene
  CGZ63_RS20680 - 3929321..3930070 (+) 750 WP_000388471.1 DUF3967 domain-containing protein -
  CGZ63_RS20685 kinB 3930109..3931383 (-) 1275 WP_088343885.1 sporulation sensor histidine kinase KinB -
  CGZ63_RS20690 - 3931694..3931894 (+) 201 WP_000929278.1 hypothetical protein -
  CGZ63_RS20695 - 3932018..3933181 (+) 1164 WP_000434582.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 16054.43 Da        Isoelectric Point: 8.4331

>NTDB_id=239562 CGZ63_RS20670 WP_000811494.1 3928660..3929094(-) (nucA/comI) [Bacillus cereus C1L]
MKQLKGIIISIIAILSILVAVYEVLVPEETSVKKTNTYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFEVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=239562 CGZ63_RS20670 WP_000811494.1 3928660..3929094(-) (nucA/comI) [Bacillus cereus C1L]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATCGCAATTCTGTCTATTTTAGTAGCAGTTTATGAAGTACTTGTGCC
AGAGGAAACAAGTGTAAAGAAAACGAATACGTATGATCAAGTGTTAGAATTTCCAAAAGAACGTTATCCAGAGACAGGAA
AACATATTACGGATGCTATAAAAGAAGGGCATTCAGAAGTTTGTACAATCGATCGTGGTGGTGCTGCAGATAGAAGGAAA
TTGTCGTTAGCACCATATCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGCAAGGAAGGCGGAAA
AGGAGCACATATTGAATATATAAGTCCGGCGGATAACCGCGGAGCAGGTTCTTGGGTAGGGAATAAGTTAGATAAATACC
CAGATGGTACGCGAGTAAAATTTGAAGTGAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

69.912

78.472

0.549

Multiple sequence alignment