Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M16_RS16125 Genome accession   NZ_CP028201
Coordinates   3193874..3194587 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SRCM102753     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3188874..3199587
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS16105 (C7M16_03177) ghrB 3189019..3189996 (+) 978 WP_080332215.1 D-glycerate dehydrogenase -
  C7M16_RS16110 (C7M16_03178) psdB 3190033..3191973 (-) 1941 WP_160221835.1 lantibiotic ABC transporter permease PsdB -
  C7M16_RS16115 (C7M16_03179) psdA 3191948..3192727 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M16_RS16120 (C7M16_03180) psdS 3192810..3193880 (-) 1071 WP_160221836.1 two-component sensor histidine kinase PsdS -
  C7M16_RS16125 (C7M16_03181) braR 3193874..3194587 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  C7M16_RS16130 (C7M16_03182) yvzJ 3194734..3194943 (+) 210 WP_003243327.1 lipoprotein -
  C7M16_RS16135 (C7M16_03183) yvcN 3194979..3195743 (-) 765 WP_080529834.1 arylamine N-acetyltransferase -
  C7M16_RS16140 (C7M16_03184) crh 3195744..3196001 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M16_RS16145 (C7M16_03185) whiA 3196025..3196975 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M16_RS16150 (C7M16_03186) mgfK 3196998..3197951 (-) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  C7M16_RS16155 (C7M16_03187) rapZ 3197953..3198840 (-) 888 WP_003243903.1 RNase adapter RapZ -
  C7M16_RS16160 (C7M16_03188) rppI 3198865..3199341 (-) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=239498 C7M16_RS16125 WP_003244535.1 3193874..3194587(-) (braR) [Bacillus subtilis strain SRCM102753]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=239498 C7M16_RS16125 WP_003244535.1 3193874..3194587(-) (braR) [Bacillus subtilis strain SRCM102753]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCGTCCGTATTCTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment