Detailed information
Bioinformatically predicted
Overview
| Name | waaF | Type | Regulator |
| Locus tag | CGZ78_RS05610 | Genome accession | NZ_CP022440 |
| Coordinates | 1082335..1083288 (+) | Length | 317 a.a. |
| NCBI ID | WP_002869014.1 | Uniprot ID | A0A5Y9JB79 |
| Organism | Campylobacter jejuni strain 81-176_G1_B0 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1077335..1088288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ78_RS05585 (CGZ78_05590) | neuC | 1077912..1079036 (+) | 1125 | WP_002869019.1 | UDP-N-acetylglucosamine 2-epimerase | - |
| CGZ78_RS05590 (CGZ78_05595) | - | 1079029..1079571 (+) | 543 | Protein_1068 | beta-1,4-N-acetylgalactosaminyltransferase | - |
| CGZ78_RS08460 | - | 1079643..1079975 (+) | 333 | WP_019260376.1 | hypothetical protein | - |
| CGZ78_RS05595 (CGZ78_05600) | - | 1079972..1080637 (+) | 666 | WP_002869017.1 | acylneuraminate cytidylyltransferase family protein | - |
| CGZ78_RS08620 (CGZ78_05605) | - | 1080625..1081368 (+) | 744 | WP_002869016.1 | CatB-related O-acetyltransferase | - |
| CGZ78_RS05605 (CGZ78_05610) | - | 1081449..1082276 (-) | 828 | WP_002869015.1 | glycosyltransferase family 2 protein | - |
| CGZ78_RS05610 (CGZ78_05615) | waaF | 1082335..1083288 (+) | 954 | WP_002869014.1 | lipopolysaccharide heptosyltransferase II | Regulator |
| CGZ78_RS05615 (CGZ78_05620) | - | 1083295..1084050 (-) | 756 | WP_002869013.1 | glycosyltransferase family 25 protein | - |
| CGZ78_RS05620 (CGZ78_05625) | gmhA | 1084050..1084610 (-) | 561 | WP_002869012.1 | D-sedoheptulose 7-phosphate isomerase | - |
| CGZ78_RS05625 (CGZ78_05630) | rfaE1 | 1084607..1085992 (-) | 1386 | WP_002869011.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| CGZ78_RS05630 (CGZ78_05635) | rfaD | 1085985..1086938 (-) | 954 | WP_002856483.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| CGZ78_RS05635 (CGZ78_05640) | gmhB | 1086939..1087499 (-) | 561 | WP_002869010.1 | D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase | - |
| CGZ78_RS05640 (CGZ78_05645) | - | 1087581..1087883 (+) | 303 | WP_002852762.1 | cytochrome c | - |
| CGZ78_RS05645 (CGZ78_05650) | ccoS | 1087906..1088112 (-) | 207 | WP_002852798.1 | cbb3-type cytochrome oxidase assembly protein CcoS | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36457.07 Da Isoelectric Point: 10.2322
>NTDB_id=239493 CGZ78_RS05610 WP_002869014.1 1082335..1083288(+) (waaF) [Campylobacter jejuni strain 81-176_G1_B0]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDVSYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEIIIEVSKQLLFLN
Nucleotide
Download Length: 954 bp
>NTDB_id=239493 CGZ78_RS05610 WP_002869014.1 1082335..1083288(+) (waaF) [Campylobacter jejuni strain 81-176_G1_B0]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACGAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGTGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGTCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTACATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCAGAAATCATCATAGAAGTAAGTAAACAATTGCTATTTCTAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| waaF | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
94.586 |
99.054 |
0.937 |