Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M16_RS14570 Genome accession   NZ_CP028201
Coordinates   2881304..2882164 (-) Length   286 a.a.
NCBI ID   WP_128422373.1    Uniprot ID   Q9R9J5
Organism   Bacillus subtilis strain SRCM102753     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2876304..2887164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS14535 (C7M16_02868) mrpE 2876532..2877008 (+) 477 WP_128422372.1 Na+/H+ antiporter subunit E -
  C7M16_RS14540 (C7M16_02869) mrpF 2877008..2877292 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M16_RS14545 (C7M16_02870) mnhG 2877276..2877650 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C7M16_RS14550 (C7M16_02871) yuxO 2877691..2878071 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  C7M16_RS14555 (C7M16_02872) comA 2878090..2878734 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M16_RS14560 (C7M16_02873) comP 2878815..2881115 (-) 2301 WP_088300729.1 histidine kinase Regulator
  C7M16_RS14565 (C7M16_02874) comX 2881127..2881291 (-) 165 WP_015384519.1 competence pheromone ComX -
  C7M16_RS14570 (C7M16_02875) comQ 2881304..2882164 (-) 861 WP_128422373.1 polyprenyl synthetase family protein Regulator
  C7M16_RS14575 (C7M16_02876) degQ 2882349..2882489 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M16_RS14580 - 2882711..2882836 (+) 126 WP_144500545.1 hypothetical protein -
  C7M16_RS14585 (C7M16_02877) - 2882950..2883318 (+) 369 WP_144500544.1 hypothetical protein -
  C7M16_RS14590 (C7M16_02878) pdeH 2883294..2884523 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  C7M16_RS14595 (C7M16_02879) pncB 2884660..2886132 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M16_RS14600 (C7M16_02880) pncA 2886148..2886699 (-) 552 WP_015714627.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32618.54 Da        Isoelectric Point: 4.8309

>NTDB_id=239491 C7M16_RS14570 WP_128422373.1 2881304..2882164(-) (comQ) [Bacillus subtilis strain SRCM102753]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYRGLYYLNNDFIQKKNTLAYLYLNKRFNAASAEILSWYENTELFLSLNSKQIK
EKLTEAGVVQYLLVMKHLSLQKLKKEIARLELQENKIKKLITGIIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=239491 C7M16_RS14570 WP_128422373.1 2881304..2882164(-) (comQ) [Bacillus subtilis strain SRCM102753]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATGGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACGGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCGAGGTTTATATTATCTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACGTT
TTAATGCAGCTTCTGCAGAAATCTTGAGTTGGTATGAAAATACTGAGTTGTTCTTATCATTGAATTCCAAACAAATAAAA
GAAAAATTAACTGAGGCAGGCGTAGTGCAATATTTACTTGTAATGAAACACTTGTCATTACAAAAACTAAAGAAAGAAAT
TGCTAGATTAGAATTGCAAGAGAATAAAATAAAAAAATTAATAACAGGAATCATAAAATAA

Domains


Predicted by InterProScan.

(40-197)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9R9J5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.423

99.301

0.451


Multiple sequence alignment