Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CGZ78_RS05260 | Genome accession | NZ_CP022440 |
| Coordinates | 1013853..1014155 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 81-176_G1_B0 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1008853..1019155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ78_RS05235 (CGZ78_05240) | rpsR | 1009216..1009476 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CGZ78_RS05240 (CGZ78_05245) | lon | 1009536..1011911 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| CGZ78_RS05245 (CGZ78_05250) | - | 1011928..1012575 (-) | 648 | WP_002877748.1 | outer membrane protein assembly factor BamD | - |
| CGZ78_RS05250 (CGZ78_05255) | fliW | 1012736..1013125 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CGZ78_RS05255 (CGZ78_05260) | proC | 1013125..1013856 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CGZ78_RS05260 (CGZ78_05265) | ctsT | 1013853..1014155 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CGZ78_RS05265 (CGZ78_05270) | - | 1014152..1014814 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CGZ78_RS05270 (CGZ78_05275) | - | 1014811..1015263 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CGZ78_RS05275 (CGZ78_05280) | hemD | 1015260..1015889 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| CGZ78_RS05280 (CGZ78_05285) | thiE | 1015867..1016499 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CGZ78_RS05285 (CGZ78_05290) | thiD | 1016489..1017301 (-) | 813 | WP_002871792.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CGZ78_RS05290 (CGZ78_05295) | - | 1017298..1017984 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CGZ78_RS05295 (CGZ78_05300) | - | 1017981..1018742 (-) | 762 | WP_002871793.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=239491 CGZ78_RS05260 WP_002853046.1 1013853..1014155(+) (ctsT) [Campylobacter jejuni strain 81-176_G1_B0]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=239491 CGZ78_RS05260 WP_002853046.1 1013853..1014155(+) (ctsT) [Campylobacter jejuni strain 81-176_G1_B0]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |