Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M16_RS13760 Genome accession   NZ_CP028201
Coordinates   2738410..2739105 (-) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102753     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2733410..2744105
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS13740 (C7M16_02711) yttA 2733837..2734583 (+) 747 WP_160221761.1 LMBR1 domain-containing protein -
  C7M16_RS13745 (C7M16_02712) bceB 2734620..2736560 (-) 1941 WP_160221762.1 bacitracin ABC transporter permease BceB -
  C7M16_RS13750 (C7M16_02713) bceA 2736550..2737311 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M16_RS13755 (C7M16_02714) bceS 2737413..2738417 (-) 1005 WP_004398652.1 two-component sensor histidine kinase BceS -
  C7M16_RS13760 (C7M16_02715) braR 2738410..2739105 (-) 696 WP_033884849.1 two-component response regulator BceR Regulator
  C7M16_RS13765 (C7M16_02716) ytrF 2739203..2740513 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  C7M16_RS13770 (C7M16_02717) ytrE 2740503..2741198 (-) 696 WP_160221763.1 ABC transporter ATP-binding protein YtrE -
  C7M16_RS13775 (C7M16_02718) ytrD 2741213..2742190 (-) 978 WP_032722368.1 ABC transporter permease YtrD -
  C7M16_RS13780 (C7M16_02719) ytrC 2742220..2743206 (-) 987 WP_160221764.1 ABC transporter permease YtrC -
  C7M16_RS13785 (C7M16_02720) ytrB 2743200..2744078 (-) 879 WP_024572828.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=239488 C7M16_RS13760 WP_033884849.1 2738410..2739105(-) (braR) [Bacillus subtilis strain SRCM102753]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=239488 C7M16_RS13760 WP_033884849.1 2738410..2739105(-) (braR) [Bacillus subtilis strain SRCM102753]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment