Detailed information NTG0239467

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CGZ70_RS05705
• Genome accession: NZ_CP022439
• Coordinates: 1085088..1086047 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain 11168H/lacY
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1080088..1091047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGZ70_RS05685 (CGZ70_05685)	neuC	1080658..1081773 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
CGZ70_RS08935	-	1081770..1082684 (+)	915	Protein_1094	beta-1,4-N-acetylgalactosaminyltransferase	-
CGZ70_RS08940	-	1082718..1083380 (+)	663	WP_002881429.1	N-acylneuraminate cytidylyltransferase	-
CGZ70_RS05695 (CGZ70_05695)	-	1083375..1084221 (-)	847	Protein_1096	glycosyltransferase	-
CGZ70_RS05700 (CGZ70_05700)	waaV	1084205..1085029 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
CGZ70_RS05705 (CGZ70_05705)	waaF	1085088..1086047 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
CGZ70_RS05710 (CGZ70_05710)	gmhA	1086028..1086588 (-)	561	WP_002858021.1	D-sedoheptulose 7-phosphate isomerase	-
CGZ70_RS05715 (CGZ70_05715)	rfaE1	1086585..1087970 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CGZ70_RS05720 (CGZ70_05720)	rfaD	1087963..1088916 (-)	954	WP_002858041.1	ADP-glyceromanno-heptose 6-epimerase	-
CGZ70_RS05725 (CGZ70_05725)	gmhB	1088917..1089477 (-)	561	WP_002853963.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CGZ70_RS05730 (CGZ70_05730)	-	1089559..1089861 (+)	303	WP_002852762.1	cytochrome c	-
CGZ70_RS05735 (CGZ70_05735)	ccoS	1089884..1090090 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=239467 CGZ70_RS05705 WP_002875425.1 1085088..1086047(+) (waaF) [Campylobacter jejuni strain 11168H/lacY]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=239467 CGZ70_RS05705 WP_002875425.1 1085088..1086047(+) (waaF) [Campylobacter jejuni strain 11168H/lacY]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1