Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CGZ70_RS05360 | Genome accession | NZ_CP022439 |
| Coordinates | 1014918..1015220 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain 11168H/lacY | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1009918..1020220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGZ70_RS05335 (CGZ70_05335) | rpsR | 1010280..1010540 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CGZ70_RS05340 (CGZ70_05340) | lon | 1010601..1012976 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| CGZ70_RS05345 (CGZ70_05345) | - | 1012993..1013640 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CGZ70_RS05350 (CGZ70_05350) | fliW | 1013801..1014190 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CGZ70_RS05355 (CGZ70_05355) | proC | 1014190..1014921 (+) | 732 | WP_002858388.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CGZ70_RS05360 (CGZ70_05360) | ctsT | 1014918..1015220 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CGZ70_RS05365 (CGZ70_05365) | - | 1015217..1015879 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CGZ70_RS05370 (CGZ70_05370) | - | 1015876..1016328 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| CGZ70_RS05375 (CGZ70_05375) | hemD | 1016325..1016954 (-) | 630 | WP_002858312.1 | uroporphyrinogen-III synthase | - |
| CGZ70_RS05380 (CGZ70_05380) | thiE | 1016932..1017564 (-) | 633 | WP_002858441.1 | thiamine phosphate synthase | - |
| CGZ70_RS05385 (CGZ70_05385) | thiD | 1017554..1018366 (-) | 813 | WP_002858043.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CGZ70_RS05390 (CGZ70_05390) | - | 1018363..1019049 (-) | 687 | WP_002858132.1 | endonuclease III domain-containing protein | - |
| CGZ70_RS05395 (CGZ70_05395) | - | 1019046..1019807 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=239465 CGZ70_RS05360 WP_002853046.1 1014918..1015220(+) (ctsT) [Campylobacter jejuni strain 11168H/lacY]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=239465 CGZ70_RS05360 WP_002853046.1 1014918..1015220(+) (ctsT) [Campylobacter jejuni strain 11168H/lacY]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGACGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |