Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C7M16_RS08470 Genome accession   NZ_CP028201
Coordinates   1712858..1713475 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM102753     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1707858..1718475
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M16_RS08445 (C7M16_01668) yndJ 1708189..1709829 (+) 1641 WP_038429036.1 YndJ family protein -
  C7M16_RS08450 (C7M16_01669) - 1709907..1710221 (+) 315 WP_003245621.1 hypothetical protein -
  C7M16_RS08455 (C7M16_01670) pghL 1710446..1711204 (+) 759 WP_015714006.1 gamma-polyglutamate hydrolase PghL -
  C7M16_RS08460 (C7M16_01671) - 1711231..1711680 (-) 450 WP_015483284.1 YndM family protein -
  C7M16_RS08465 (C7M16_01672) fosB 1711889..1712308 (+) 420 WP_160221614.1 metallothiol transferase FosB -
  C7M16_RS20625 - 1712232..1712505 (+) 274 Protein_1662 hypothetical protein -
  C7M16_RS08470 (C7M16_01673) dinR/lexA 1712858..1713475 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M16_RS08475 (C7M16_01674) yneA 1713625..1713942 (+) 318 WP_015252003.1 cell division suppressor protein YneA -
  C7M16_RS08480 (C7M16_01675) dinL 1713961..1714614 (+) 654 WP_015714011.1 recombinase family protein -
  C7M16_RS08485 (C7M16_01676) ynzC 1714678..1714911 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M16_RS08490 (C7M16_01677) recP/tkt 1715080..1717083 (+) 2004 WP_128473942.1 transketolase Machinery gene
  C7M16_RS08495 (C7M16_01678) sirA 1717236..1717682 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M16_RS08500 (C7M16_01679) yneF 1717768..1717986 (+) 219 WP_003221221.1 YneF family protein -
  C7M16_RS08505 (C7M16_01680) ynzD 1718060..1718233 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=239446 C7M16_RS08470 WP_003238209.1 1712858..1713475(-) (dinR/lexA) [Bacillus subtilis strain SRCM102753]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=239446 C7M16_RS08470 WP_003238209.1 1712858..1713475(-) (dinR/lexA) [Bacillus subtilis strain SRCM102753]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGGGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCGATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACACACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1