Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | CFK40_RS01875 | Genome accession | NZ_CP022437 |
| Coordinates | 350619..351572 (-) | Length | 317 a.a. |
| NCBI ID | WP_089530407.1 | Uniprot ID | A0A221M868 |
| Organism | Virgibacillus necropolis strain LMG 19488 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 345619..356572
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CFK40_RS01845 (CFK40_01845) | - | 345686..346135 (+) | 450 | WP_089530401.1 | GNAT family N-acetyltransferase | - |
| CFK40_RS01855 (CFK40_01855) | - | 346692..346901 (+) | 210 | WP_089530403.1 | hypothetical protein | - |
| CFK40_RS01860 (CFK40_01860) | - | 347258..348274 (-) | 1017 | WP_089530404.1 | siderophore ABC transporter substrate-binding protein | - |
| CFK40_RS01865 (CFK40_01865) | - | 348891..349676 (-) | 786 | WP_089530405.1 | ABC transporter ATP-binding protein | - |
| CFK40_RS01870 (CFK40_01870) | - | 349673..350629 (-) | 957 | WP_089530406.1 | iron chelate uptake ABC transporter family permease subunit | - |
| CFK40_RS01875 (CFK40_01875) | ceuB | 350619..351572 (-) | 954 | WP_089530407.1 | ABC transporter permease | Machinery gene |
| CFK40_RS20690 | - | 352049..352183 (+) | 135 | Protein_350 | ABC transporter | - |
| CFK40_RS01880 (CFK40_01880) | - | 352548..352925 (-) | 378 | WP_089530408.1 | group-specific protein | - |
| CFK40_RS01885 (CFK40_01885) | - | 352986..353528 (-) | 543 | WP_089530409.1 | GNAT family N-acetyltransferase | - |
| CFK40_RS01890 (CFK40_01890) | - | 353670..354146 (+) | 477 | WP_089530410.1 | helix-hairpin-helix domain-containing protein | - |
| CFK40_RS01895 (CFK40_01895) | - | 354198..354557 (-) | 360 | WP_089530411.1 | Lin0512 family protein | - |
| CFK40_RS01900 (CFK40_01900) | - | 354668..354910 (-) | 243 | WP_089530412.1 | RNA polymerase sigma factor | - |
| CFK40_RS01905 (CFK40_01905) | - | 355030..355782 (+) | 753 | WP_089530413.1 | AAA family ATPase | - |
| CFK40_RS01910 (CFK40_01910) | - | 355802..356308 (-) | 507 | WP_089530414.1 | DUF4188 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 34698.93 Da Isoelectric Point: 9.5927
>NTDB_id=239423 CFK40_RS01875 WP_089530407.1 350619..351572(-) (ceuB) [Virgibacillus necropolis strain LMG 19488]
MKLWMIIIIGVVLSFISLFIGAIDIKPSDLLNWESDKTQIFLISRVPRLIAIILAGAGMSIAGLIMQSLSQNKFVSPTTA
GTLDAAKLGIMISMLFLTNVTYTQQVIFSFAFALVGTLVFMQILDRIKFKDVIFIPLIGIMYGNILSSITVFFGYEADIL
QNLSSWLMGSFTLIIAGRYELLYVSVPAIILAYLYANKFTVAGMGEDFAKNVGLSYKFVLNIGLTLVAIISTSVVLTVGV
IPFLGLIVPNIVSIYMGDNIRKTIPHTMAVGVVFLLICDIIGRIIIQPFEIPVNVTVAVIGSAIFLIMLFRGRAYAK
MKLWMIIIIGVVLSFISLFIGAIDIKPSDLLNWESDKTQIFLISRVPRLIAIILAGAGMSIAGLIMQSLSQNKFVSPTTA
GTLDAAKLGIMISMLFLTNVTYTQQVIFSFAFALVGTLVFMQILDRIKFKDVIFIPLIGIMYGNILSSITVFFGYEADIL
QNLSSWLMGSFTLIIAGRYELLYVSVPAIILAYLYANKFTVAGMGEDFAKNVGLSYKFVLNIGLTLVAIISTSVVLTVGV
IPFLGLIVPNIVSIYMGDNIRKTIPHTMAVGVVFLLICDIIGRIIIQPFEIPVNVTVAVIGSAIFLIMLFRGRAYAK
Nucleotide
Download Length: 954 bp
>NTDB_id=239423 CFK40_RS01875 WP_089530407.1 350619..351572(-) (ceuB) [Virgibacillus necropolis strain LMG 19488]
ATGAAACTATGGATGATAATAATTATAGGTGTGGTCCTGTCATTTATATCACTGTTTATCGGGGCGATTGATATTAAGCC
TAGCGACTTACTAAATTGGGAATCTGATAAAACACAAATTTTCTTAATCAGTCGAGTTCCTCGTTTAATAGCGATAATAT
TAGCTGGGGCAGGAATGAGTATAGCGGGTTTAATTATGCAAAGTTTAAGCCAAAATAAGTTTGTATCTCCAACAACAGCT
GGTACATTAGATGCGGCTAAATTAGGAATTATGATTTCGATGCTGTTCCTCACGAATGTTACCTATACACAACAAGTTAT
TTTCAGCTTTGCATTTGCTTTAGTTGGAACCCTGGTTTTTATGCAAATATTGGATCGTATTAAATTTAAAGATGTCATTT
TTATTCCGTTAATCGGGATTATGTATGGAAATATTTTATCATCAATCACAGTATTTTTTGGATATGAGGCAGACATTCTC
CAAAATCTTTCATCCTGGTTAATGGGTAGCTTCACGTTAATTATTGCAGGGCGCTATGAGCTATTATATGTAAGTGTTCC
AGCTATTATTTTAGCTTACCTTTATGCGAACAAATTTACGGTTGCTGGTATGGGTGAGGATTTTGCAAAAAACGTAGGAT
TAAGCTATAAGTTTGTACTTAATATCGGACTTACTCTTGTTGCGATTATTTCTACTTCAGTCGTACTAACTGTTGGTGTT
ATTCCGTTCTTAGGTCTTATCGTACCTAATATTGTATCTATTTATATGGGTGATAATATACGTAAAACAATTCCTCATAC
AATGGCAGTAGGAGTTGTATTCTTGTTAATTTGTGATATTATCGGTCGCATCATTATCCAGCCGTTTGAGATACCGGTAA
ACGTAACAGTAGCAGTAATTGGCAGTGCGATCTTCTTAATAATGCTTTTTAGGGGGAGAGCATATGCGAAGTAA
ATGAAACTATGGATGATAATAATTATAGGTGTGGTCCTGTCATTTATATCACTGTTTATCGGGGCGATTGATATTAAGCC
TAGCGACTTACTAAATTGGGAATCTGATAAAACACAAATTTTCTTAATCAGTCGAGTTCCTCGTTTAATAGCGATAATAT
TAGCTGGGGCAGGAATGAGTATAGCGGGTTTAATTATGCAAAGTTTAAGCCAAAATAAGTTTGTATCTCCAACAACAGCT
GGTACATTAGATGCGGCTAAATTAGGAATTATGATTTCGATGCTGTTCCTCACGAATGTTACCTATACACAACAAGTTAT
TTTCAGCTTTGCATTTGCTTTAGTTGGAACCCTGGTTTTTATGCAAATATTGGATCGTATTAAATTTAAAGATGTCATTT
TTATTCCGTTAATCGGGATTATGTATGGAAATATTTTATCATCAATCACAGTATTTTTTGGATATGAGGCAGACATTCTC
CAAAATCTTTCATCCTGGTTAATGGGTAGCTTCACGTTAATTATTGCAGGGCGCTATGAGCTATTATATGTAAGTGTTCC
AGCTATTATTTTAGCTTACCTTTATGCGAACAAATTTACGGTTGCTGGTATGGGTGAGGATTTTGCAAAAAACGTAGGAT
TAAGCTATAAGTTTGTACTTAATATCGGACTTACTCTTGTTGCGATTATTTCTACTTCAGTCGTACTAACTGTTGGTGTT
ATTCCGTTCTTAGGTCTTATCGTACCTAATATTGTATCTATTTATATGGGTGATAATATACGTAAAACAATTCCTCATAC
AATGGCAGTAGGAGTTGTATTCTTGTTAATTTGTGATATTATCGGTCGCATCATTATCCAGCCGTTTGAGATACCGGTAA
ACGTAACAGTAGCAGTAATTGGCAGTGCGATCTTCTTAATAATGCTTTTTAGGGGGAGAGCATATGCGAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
53.156 |
94.953 |
0.505 |