Detailed information NTG0023932

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: TRNA_RS35120
• Genome accession: NC_006270
• Coordinates: 2645871..2648258 (-)
• Length: 795 a.a.
• NCBI ID: WP_009327865.1
• Uniprot ID: Q8VQ75
• Organism: Bacillus licheniformis DSM 13 = ATCC 14580
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2640871..2653258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TRNA_RS35090 (BL02091)	-	2641140..2641463 (-)	324	WP_003183676.1	YqxA family protein	-
TRNA_RS35095 (BL02090)	spoIIP	2641479..2642684 (-)	1206	WP_003183678.1	stage II sporulation protein P	-
TRNA_RS35100 (BL02089)	gpr	2642803..2643909 (-)	1107	WP_009327867.1	GPR endopeptidase	-
TRNA_RS35105 (BL02113)	rpsT	2644114..2644380 (+)	267	WP_003183682.1	30S ribosomal protein S20	-
TRNA_RS35110 (BL02088)	holA	2644442..2645485 (-)	1044	WP_009327866.1	DNA polymerase III subunit delta	-
TRNA_RS43360 (BL02112)	-	2645715..2645846 (+)	132	WP_003183686.1	YqzM family protein	-
TRNA_RS35120 (BL02087)	comEC	2645871..2648258 (-)	2388	WP_009327865.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
TRNA_RS35125 (BL02086)	-	2648262..2648831 (-)	570	WP_003183690.1	ComE operon protein 2	-
TRNA_RS35130 (BL02085)	comEA	2648900..2649529 (-)	630	WP_003183693.1	helix-hairpin-helix domain-containing protein	Machinery gene
TRNA_RS35135 (BL02111)	comER	2649613..2650434 (+)	822	WP_011198131.1	late competence protein ComER	-
TRNA_RS35140 (BL02084)	-	2650504..2651259 (-)	756	WP_011198132.1	class I SAM-dependent DNA methyltransferase	-
TRNA_RS35145 (BL02083)	rsfS	2651256..2651612 (-)	357	WP_003183699.1	ribosome silencing factor	-
TRNA_RS35150 (BL02082)	yqeK	2651626..2652189 (-)	564	WP_003183701.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
TRNA_RS35155 (BL02081)	-	2652179..2652748 (-)	570	WP_003183702.1	nicotinate-nucleotide adenylyltransferase	-
TRNA_RS35160 (BL02080)	yhbY	2652767..2653057 (-)	291	WP_003183704.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 795 a.a.
• Molecular weight: 87815.76 Da
• Isoelectric Point: 8.3336

>NTDB_id=23932 TRNA_RS35120 WP_009327865.1 2645871..2648258(-) (comEC) [Bacillus licheniformis DSM 13 = ATCC 14580]
MDRHRIFPCGAISAAAGIASAHSSLYLFLAVGFFLFFILCFFKKQILLFALCAAVCILYFTSFYVIDHFNTTIYHEGKFH
TLASVQDIPVIDGDRLSFTAETDEGEALKAGYTLRSPQEKRALSALQPGSLCVMQGELKEPKKETVPGTFNQKESMYQKG
IHWIFAVQSITSCKPGGGLMPSLLKIRKAGLDFIEENMADSAAGIGRALIFGDRFLIEQDVLDGYQRLGIIHLLAISGLH
VGLLSAALFYIFIRFGVTRECAKWLLVIGLPVAAVLTGGAPSVMRAVFMSEIYLLASLSKKNFKSADVISIACLGLLLYH
PYLLFQAGFQLSFAVSFVFILSKEILTRPKSRISQLLLGSFLAQLASLPILLFHFQEFSFLSTLMNLFFIPLYIFIIMPL
SFGSLLAFICFHPLGEAAAAVLDRLLVWSHQAVKTVSAADVSVFSAAKPPDLLLFFYFTAIFLFLLLLEKEMSLRAVMIP
SGLLAAVFVIHACLPQLAGEGEVTMLDIGQGDSMYVSAPGQNGTVFIDTGGTVSFRKERWRKRKKDFSLGESVLMPFLAT
KGVKKLDALILTHADQDHIGEAHVLIQKHKVKQLIVPKGFAAEPSDEKLLRLALKEGVEVNVAKRGDILHIGNLEFYVLS
PKEADKNSKNNGSLVLWMKAGGFSWLLTGDLEKEGEKEMMEVYPNLKADILKVGHHGSKGSTGEELIKQIEPKTALISAG
EHNRYGHPHGEVLDILNRHDVKVFRTDRHGSIQHLFRGGNGTFLLHPPYDKVHSPQEKMTAEKQQSSKSRLPDGE

Nucleotide

• Length: 2388 bp

>NTDB_id=23932 TRNA_RS35120 WP_009327865.1 2645871..2648258(-) (comEC) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGGACAGACATCGCATCTTCCCGTGCGGAGCGATTTCAGCGGCAGCCGGAATCGCCTCCGCTCACTCTTCTCTTTATCT
CTTCCTCGCCGTCGGTTTTTTTCTGTTCTTTATCCTCTGTTTCTTCAAAAAACAAATACTCCTTTTCGCTTTATGTGCAG
CGGTTTGTATTTTATATTTTACTTCTTTTTACGTGATCGACCATTTCAATACAACGATTTATCATGAAGGCAAATTTCAC
ACGCTCGCTTCTGTTCAGGATATTCCCGTAATAGACGGAGACCGGCTTTCTTTCACAGCCGAAACAGATGAGGGAGAAGC
TTTGAAAGCGGGATATACGCTCCGGTCTCCACAAGAAAAACGGGCGCTCTCAGCTCTTCAGCCGGGCAGCCTCTGTGTCA
TGCAAGGTGAATTAAAAGAGCCGAAAAAAGAGACGGTTCCTGGCACTTTTAATCAAAAAGAATCCATGTATCAAAAAGGG
ATTCACTGGATTTTTGCAGTTCAGTCTATTACAAGCTGCAAGCCGGGCGGCGGCCTGATGCCATCTCTATTGAAAATCAG
AAAAGCGGGCCTTGATTTTATAGAGGAAAATATGGCGGACTCGGCTGCCGGTATTGGAAGAGCGCTAATTTTCGGAGACC
GGTTTCTCATTGAACAAGATGTCCTGGACGGCTATCAGCGTCTTGGAATCATTCACCTTTTAGCGATTTCCGGGCTTCAT
GTCGGTCTGCTCTCAGCCGCTCTGTTTTACATATTTATTCGCTTCGGCGTCACGAGGGAATGCGCAAAATGGCTGCTCGT
GATCGGCCTTCCCGTTGCCGCAGTTTTGACCGGAGGCGCCCCGTCGGTGATGAGAGCGGTTTTCATGTCTGAAATCTATC
TGCTGGCATCACTGTCTAAAAAGAACTTCAAAAGTGCCGATGTGATCAGCATTGCCTGCCTCGGACTGCTGCTGTATCAT
CCTTATCTGTTATTTCAAGCCGGATTCCAGCTTTCTTTTGCTGTATCCTTCGTTTTCATTCTTTCAAAGGAGATATTGAC
CAGGCCGAAAAGCCGAATCTCTCAGCTGCTATTGGGGTCATTTTTGGCTCAGCTCGCTTCCCTCCCGATTCTGCTTTTTC
ATTTTCAAGAGTTTTCATTTCTCAGCACATTAATGAATCTATTTTTTATACCTCTTTATATTTTCATCATCATGCCGCTG
TCTTTCGGAAGCCTGCTTGCTTTCATATGTTTTCATCCCTTGGGGGAGGCGGCAGCCGCCGTTCTTGACCGTCTGCTTGT
GTGGAGCCATCAGGCTGTTAAAACGGTGTCTGCCGCGGATGTTTCGGTCTTTTCTGCGGCTAAGCCGCCGGATCTTTTGT
TGTTTTTCTACTTCACAGCCATTTTTCTGTTTTTGCTGTTGCTGGAAAAAGAGATGTCGCTTCGTGCGGTCATGATTCCG
TCCGGCCTGCTTGCTGCTGTGTTTGTGATTCACGCATGTCTTCCTCAGCTTGCAGGTGAGGGAGAGGTTACAATGCTTGA
TATCGGCCAAGGGGACAGCATGTATGTCAGCGCTCCCGGTCAGAATGGCACGGTCTTCATTGATACGGGAGGAACCGTAT
CCTTCCGGAAAGAGCGGTGGAGAAAGCGGAAGAAGGATTTTTCATTGGGGGAGAGCGTGTTAATGCCTTTTCTGGCAACC
AAAGGGGTCAAGAAGCTCGATGCTTTAATTTTGACCCATGCTGATCAGGATCATATCGGTGAAGCGCATGTGCTGATCCA
AAAACATAAAGTGAAGCAATTGATCGTGCCGAAAGGCTTCGCAGCCGAACCGTCTGATGAAAAGCTGCTTCGCCTTGCCT
TGAAGGAAGGCGTCGAGGTGAATGTAGCCAAAAGAGGTGACATCCTTCATATTGGCAATCTTGAATTTTATGTTCTTTCA
CCGAAAGAGGCGGACAAAAACAGCAAAAACAATGGTTCCCTCGTATTGTGGATGAAAGCAGGCGGATTTTCGTGGCTGTT
AACTGGAGATTTGGAGAAGGAGGGCGAAAAGGAGATGATGGAAGTGTATCCGAATCTTAAAGCGGATATTCTGAAAGTCG
GTCACCATGGAAGCAAAGGTTCGACGGGTGAAGAGCTGATCAAGCAAATTGAGCCGAAAACCGCCCTCATTTCGGCGGGG
GAGCACAACCGCTACGGGCATCCCCACGGGGAAGTGCTGGACATCCTAAACCGCCACGATGTGAAGGTGTTCAGAACGGA
TCGGCACGGTTCGATTCAGCACCTATTTCGAGGCGGGAACGGAACGTTTTTGCTACATCCTCCATATGATAAAGTACATT
CCCCGCAAGAAAAAATGACTGCTGAAAAACAGCAGTCGTCAAAAAGCCGCTTGCCTGACGGAGAGTAA

Domains

Predicted by InterProScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (509-720)

• Competence protein (Competence) (209-470)

• Domain of unknown function (DUF4131) (DUF4131) (24-171)

3D structure

• AlphaFold DB: Q8VQ75

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	48.235	96.226	0.464