Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C9J86_RS08420 Genome accession   NZ_CP028190
Coordinates   1618758..1619432 (+) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus strain CFSAN018749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1613758..1624432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J86_RS08390 (C9J86_08390) - 1613985..1615052 (+) 1068 WP_000980141.1 membrane protein -
  C9J86_RS08395 (C9J86_08395) - 1615203..1616246 (+) 1044 WP_001030763.1 alpha/beta hydrolase -
  C9J86_RS08405 (C9J86_08405) - 1616574..1617002 (+) 429 WP_000198502.1 hypothetical protein -
  C9J86_RS08410 (C9J86_08410) - 1617200..1617706 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  C9J86_RS08415 (C9J86_08415) graX 1617819..1618742 (+) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  C9J86_RS08420 (C9J86_08420) braR 1618758..1619432 (+) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  C9J86_RS08425 (C9J86_08425) graS 1619425..1620465 (+) 1041 WP_053865671.1 histidine kinase GraS/ApsS -
  C9J86_RS08430 (C9J86_08430) vraF 1620612..1621373 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  C9J86_RS08435 (C9J86_08435) - 1621363..1623252 (+) 1890 WP_107285526.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=239239 C9J86_RS08420 WP_001166499.1 1618758..1619432(+) (braR) [Staphylococcus aureus strain CFSAN018749]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=239239 C9J86_RS08420 WP_001166499.1 1618758..1619432(+) (braR) [Staphylococcus aureus strain CFSAN018749]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406

Multiple sequence alignment