Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C9J90_RS12430 Genome accession   NZ_CP028189
Coordinates   2414830..2415504 (+) Length   224 a.a.
NCBI ID   WP_001166500.1    Uniprot ID   Q99VW2
Organism   Staphylococcus aureus strain CFSAN018750     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2409830..2420504
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J90_RS12400 (C9J90_12380) - 2410045..2411112 (+) 1068 WP_000980137.1 membrane protein -
  C9J90_RS12405 (C9J90_12385) - 2411263..2412306 (+) 1044 WP_001030771.1 alpha/beta hydrolase -
  C9J90_RS12415 (C9J90_12395) - 2412635..2413063 (+) 429 WP_000198504.1 hypothetical protein -
  C9J90_RS12420 (C9J90_12400) - 2413272..2413778 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  C9J90_RS12425 (C9J90_12405) graX 2413891..2414814 (+) 924 WP_000802955.1 auxiliary protein GraX/ApsX -
  C9J90_RS12430 (C9J90_12410) braR 2414830..2415504 (+) 675 WP_001166500.1 response regulator transcription factor GraR/ApsR Regulator
  C9J90_RS12435 (C9J90_12415) graS 2415497..2416537 (+) 1041 WP_001061247.1 histidine kinase GraS/ApsS -
  C9J90_RS12440 (C9J90_12420) vraF 2416681..2417442 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  C9J90_RS12445 (C9J90_12425) vraG 2417432..2419321 (+) 1890 WP_000143612.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26065.87 Da        Isoelectric Point: 4.3563

>NTDB_id=239192 C9J90_RS12430 WP_001166500.1 2414830..2415504(+) (braR) [Staphylococcus aureus strain CFSAN018750]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=239192 C9J90_RS12430 WP_001166500.1 2414830..2415504(+) (braR) [Staphylococcus aureus strain CFSAN018750]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAACCGTTCTATACCAATGTATT
AATTGCTAAATTACAAGCGATTTATCGTCGTGTCTATGAGTTTACAGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q99VW2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397