Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   C9J90_RS05770 Genome accession   NZ_CP028189
Coordinates   1113451..1113921 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain CFSAN018750     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1108451..1118921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J90_RS05750 (C9J90_05730) coaW 1108760..1109563 (+) 804 WP_000862727.1 type II pantothenate kinase -
  C9J90_RS05755 (C9J90_05735) - 1109693..1110364 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  C9J90_RS05760 (C9J90_05740) ldmS 1110763..1111956 (-) 1194 WP_031590228.1 L-aspartate--L-methionine ligase LdmS -
  C9J90_RS05765 (C9J90_05745) - 1111956..1113140 (-) 1185 WP_001291497.1 M20 family metallopeptidase -
  C9J90_RS05770 (C9J90_05750) luxS 1113451..1113921 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  C9J90_RS05775 (C9J90_05755) - 1114073..1114423 (-) 351 WP_001024035.1 membrane protein -
  C9J90_RS05780 (C9J90_05760) - 1114437..1115738 (-) 1302 WP_001242319.1 pyrimidine-nucleoside phosphorylase -
  C9J90_RS05790 (C9J90_05770) deoC 1116017..1116679 (-) 663 WP_001083325.1 deoxyribose-phosphate aldolase -
  C9J90_RS05795 (C9J90_05775) deoD 1116994..1117704 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  C9J90_RS05800 (C9J90_05780) - 1117825..1118268 (-) 444 WP_000070866.1 Dps family protein -
  C9J90_RS05805 (C9J90_05785) - 1118468..1118881 (-) 414 WP_001123303.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=239173 C9J90_RS05770 WP_000164421.1 1113451..1113921(+) (luxS) [Staphylococcus aureus strain CFSAN018750]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=239173 C9J90_RS05770 WP_000164421.1 1113451..1113921(+) (luxS) [Staphylococcus aureus strain CFSAN018750]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCAG
GACTACATTCATTAGAACATTTAATGGCTGAAAATATTAGGAATCATAGTGACAAAGTTGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404