Detailed information NTG0239160

Bioinformatically predicted

Overview

• Name: ceuB
• Type: Machinery gene
• Locus tag: CGS26_RS05440
• Genome accession: NZ_CP022405
• Coordinates: 1170355..1171308 (+)
• Length: 317 a.a.
• NCBI ID: WP_003489433.1
• Uniprot ID: A0A0D0ZWJ2
• Organism: Clostridium sporogenes strain AM553
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1165355..1176308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CGS26_RS05415 (CGS26_05505)	-	1165871..1166179 (+)	309	WP_043031716.1	hypothetical protein	-
CGS26_RS05420 (CGS26_05510)	-	1166591..1166827 (+)	237	WP_003491496.1	SHOCT domain-containing protein	-
CGS26_RS05425 (CGS26_05515)	-	1167089..1167790 (+)	702	WP_043031717.1	response regulator transcription factor	-
CGS26_RS05430 (CGS26_05520)	-	1167790..1169196 (+)	1407	WP_043031718.1	sensor histidine kinase	-
CGS26_RS05435 (CGS26_05525)	-	1169353..1170111 (-)	759	WP_043031719.1	helix-turn-helix domain-containing protein	-
CGS26_RS05440 (CGS26_05530)	ceuB	1170355..1171308 (+)	954	WP_003489433.1	ABC transporter permease	Machinery gene
CGS26_RS05445 (CGS26_05535)	-	1171298..1172248 (+)	951	WP_042386390.1	iron chelate uptake ABC transporter family permease subunit	-
CGS26_RS05450 (CGS26_05540)	-	1172245..1173000 (+)	756	WP_003489437.1	ABC transporter ATP-binding protein	-
CGS26_RS05455 (CGS26_05545)	-	1173075..1174019 (+)	945	WP_043031720.1	siderophore ABC transporter substrate-binding protein	-
CGS26_RS05460 (CGS26_05555)	-	1174221..1175222 (+)	1002	WP_043031721.1	helix-turn-helix domain-containing protein	-
CGS26_RS05465 (CGS26_05560)	-	1175405..1176007 (+)	603	WP_042386393.1	MptD family putative ECF transporter S component	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34858.13 Da
• Isoelectric Point: 10.0770

>NTDB_id=239160 CGS26_RS05440 WP_003489433.1 1170355..1171308(+) (ceuB) [Clostridium sporogenes strain AM553]
MKKRYLILALIILSICSIFIGVKDISFVDIFNSDDVKLKVLLISRIPRLISIIVVGGSMSIAGLIMQQISRNKFVSPDTA
STVDSAKLGILVALMIFPSATLTEKMIVSFIFSLLGTFLFMKILKKIKVKNSIFIPLVGIMLGNIIDSITTFFAYKYNLI
QSIASWLQGDFSLIIKGNYELIYLSLPIVVIAFIYANKFTVAGMGEDFSKNLGVNYNRIINIGLVIVALISSLVVITVGK
IPFLGLIVPNIVTLYKGDNLKNSLYSTALLGSVFLLGCDILGRLIIYPYEISIGLVVGVIGSTVFLYLLFRRNGNEV

Nucleotide

• Length: 954 bp

>NTDB_id=239160 CGS26_RS05440 WP_003489433.1 1170355..1171308(+) (ceuB) [Clostridium sporogenes strain AM553]
ATGAAAAAGAGATATTTAATTTTAGCATTAATTATTCTATCTATTTGTTCAATATTTATTGGAGTAAAAGATATTAGCTT
TGTAGATATATTTAATTCAGATGATGTAAAGCTTAAGGTATTATTAATAAGTAGAATTCCAAGACTTATAAGTATTATTG
TAGTAGGAGGGAGTATGAGTATAGCAGGACTTATCATGCAACAAATAAGTCGGAATAAATTCGTATCACCAGATACAGCT
TCAACTGTAGATAGTGCAAAACTTGGGATTTTGGTTGCTTTAATGATATTTCCTTCCGCAACTCTCACTGAAAAAATGAT
AGTTTCTTTCATATTTTCTTTATTAGGCACATTCTTATTTATGAAAATTTTAAAGAAAATAAAAGTTAAAAATTCTATAT
TTATACCACTTGTAGGTATAATGCTTGGGAATATAATAGATTCAATAACTACGTTTTTTGCATATAAATATAATCTTATT
CAAAGTATTGCCTCTTGGCTTCAAGGTGATTTTTCTTTAATTATTAAAGGAAATTATGAGCTTATATACCTGAGTCTACC
TATTGTAGTCATAGCTTTTATTTATGCTAATAAATTTACAGTAGCAGGTATGGGAGAGGATTTCTCTAAGAATTTAGGGG
TTAATTATAACAGAATCATAAATATAGGACTTGTAATAGTAGCATTAATATCTTCACTGGTAGTTATTACTGTAGGAAAA
ATACCATTTTTAGGTCTTATAGTACCTAATATAGTTACTCTTTATAAAGGAGATAATTTAAAAAATAGTCTTTATAGTAC
AGCATTGCTTGGATCAGTATTTCTCTTAGGCTGTGACATACTAGGTAGATTAATTATTTATCCTTATGAAATATCTATAG
GACTTGTAGTTGGGGTTATAGGAAGTACAGTATTCCTTTATCTCTTGTTTAGGAGGAATGGCAATGAAGTGTAG

Domains

Predicted by InterproScan.

• FecCD transport family (FecCD) (10-311)

3D structure

• AlphaFold DB: A0A0D0ZWJ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	50.804	98.107	0.498