Detailed information NTG0239066

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: C9J79_RS08735
• Genome accession: NZ_CP028185
• Coordinates: 1674775..1675734 (+)
• Length: 319 a.a.
• NCBI ID: WP_070309048.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CFSAN054107
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1669775..1680734

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9J79_RS08715 (C9J79_08710)	-	1670334..1671533 (-)	1200	WP_032591570.1	glycosyltransferase family 8 protein	-
C9J79_RS08720 (C9J79_08715)	-	1671526..1672677 (-)	1152	WP_032591573.1	glycosyltransferase family 8 protein	-
C9J79_RS08725 (C9J79_08720)	-	1672690..1673838 (-)	1149	WP_079344032.1	FkbM family methyltransferase	-
C9J79_RS08730 (C9J79_08725)	waaV	1673901..1674716 (-)	816	WP_060806422.1	glycosyltransferase family 2 protein	-
C9J79_RS08735 (C9J79_08730)	waaF	1674775..1675734 (+)	960	WP_070309048.1	lipopolysaccharide heptosyltransferase II	Regulator
C9J79_RS08740 (C9J79_08735)	gmhA	1675715..1676275 (-)	561	WP_020247045.1	D-sedoheptulose 7-phosphate isomerase	-
C9J79_RS08745 (C9J79_08740)	rfaE1	1676272..1677657 (-)	1386	WP_107131200.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
C9J79_RS08750 (C9J79_08745)	rfaD	1677650..1678603 (-)	954	WP_002860242.1	ADP-glyceromanno-heptose 6-epimerase	-
C9J79_RS08755 (C9J79_08750)	gmhB	1678604..1679165 (-)	562	Protein_1700	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
C9J79_RS08760 (C9J79_08755)	-	1679246..1679548 (+)	303	WP_002852762.1	cytochrome c	-
C9J79_RS08765 (C9J79_08760)	ccoS	1679571..1679777 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36789.44 Da
• Isoelectric Point: 10.4034

>NTDB_id=239066 C9J79_RS08735 WP_070309048.1 1674775..1675734(+) (waaF) [Campylobacter jejuni strain CFSAN054107]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQVLSLRKKLGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLHIKAHLKDLKLPFKLKFQSLLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCDEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GSMHISAVYKVKTVAIFGPTKFTQTSPWQNENARWVHLNLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=239066 C9J79_RS08735 WP_070309048.1 1674775..1675734(+) (waaF) [Campylobacter jejuni strain CFSAN054107]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTACAAACAAGTCCTATCTTTACGCAAAAAACTTGGCAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTCACATAAAAGCTCACCTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAGCCTTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGTCAAAGTCATGAAATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTCTGCGATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAACCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGTGATCTTTTCATCACAAATGACAGT
GGCTCTATGCACATAAGTGCGGTTTACAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACCTCACC
TTGGCAAAATGAAAATGCAAGATGGGTGCATTTAAATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	91.85	100	0.919