Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | TRNA_RS30680 | Genome accession | NC_006270 |
| Coordinates | 1809160..1809522 (+) | Length | 120 a.a. |
| NCBI ID | WP_003181796.1 | Uniprot ID | A0A6I1MJA4 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1804160..1814522
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS30650 (BL01265) | flgD | 1805004..1805471 (+) | 468 | WP_003181782.1 | flagellar hook assembly protein FlgD | - |
| TRNA_RS30655 (BL01264) | flgG | 1805499..1806290 (+) | 792 | WP_003181784.1 | flagellar basal body rod protein FlgG | - |
| TRNA_RS30660 (BL05161) | - | 1806333..1806548 (+) | 216 | WP_003181786.1 | flagellar FlbD family protein | - |
| TRNA_RS30665 (BL01263) | fliL | 1806545..1806976 (+) | 432 | WP_009328514.1 | flagellar basal body-associated protein FliL | - |
| TRNA_RS30670 (BL01262) | fliM | 1807012..1808010 (+) | 999 | WP_003181789.1 | flagellar motor switch protein FliM | - |
| TRNA_RS30675 (BL01261) | fliY | 1808000..1809133 (+) | 1134 | WP_003181794.1 | flagellar motor switch phosphatase FliY | - |
| TRNA_RS30680 (BL01260) | pilH | 1809160..1809522 (+) | 363 | WP_003181796.1 | response regulator | Machinery gene |
| TRNA_RS30685 (BL01259) | fliZ | 1809535..1810209 (+) | 675 | WP_009328513.1 | flagella biosynthesis regulatory protein FliZ | - |
| TRNA_RS30690 (BL01258) | fliP | 1810202..1810867 (+) | 666 | WP_009328512.1 | flagellar type III secretion system pore protein FliP | - |
| TRNA_RS30695 (BL01257) | fliQ | 1810883..1811152 (+) | 270 | WP_003181801.1 | flagellar biosynthesis protein FliQ | - |
| TRNA_RS30700 (BL01256) | fliR | 1811160..1811936 (+) | 777 | WP_011197977.1 | flagellar biosynthetic protein FliR | - |
| TRNA_RS30705 (BL01255) | flhB | 1811936..1813015 (+) | 1080 | WP_003181806.1 | flagellar biosynthesis protein FlhB | - |
Sequence
Protein
Download Length: 120 a.a. Molecular weight: 13280.60 Da Isoelectric Point: 4.5762
>NTDB_id=23900 TRNA_RS30680 WP_003181796.1 1809160..1809522(+) (pilH) [Bacillus licheniformis DSM 13 = ATCC 14580]
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
MAYKILVVDDAAFMRMMIKDILVKNGFEVVAEAQDGAQAVEKYKEHSPDLVTMDITMPEKDGITALKEIKEIDPQAKIIM
CSAMGQQSMVIDAIQAGAKDFIVKPFQADRVMEAINKTLS
Nucleotide
Download Length: 363 bp
>NTDB_id=23900 TRNA_RS30680 WP_003181796.1 1809160..1809522(+) (pilH) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
ATGGCTTACAAGATTTTAGTAGTTGATGATGCAGCATTTATGAGAATGATGATTAAAGATATTTTGGTGAAAAACGGCTT
TGAAGTCGTCGCAGAAGCGCAAGACGGGGCACAGGCTGTTGAAAAGTATAAAGAGCATTCACCTGATCTTGTCACAATGG
ATATCACGATGCCGGAAAAAGACGGAATCACGGCTCTTAAAGAAATCAAGGAAATCGATCCGCAGGCAAAAATCATCATG
TGTTCGGCAATGGGCCAGCAATCGATGGTTATCGACGCCATCCAGGCGGGAGCGAAAGACTTTATCGTCAAACCGTTCCA
GGCTGACCGCGTCATGGAAGCCATCAATAAAACGCTAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
38.136 |
98.333 |
0.375 |