Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C9J78_RS11290 Genome accession   NZ_CP028165
Coordinates   2233509..2234183 (+) Length   224 a.a.
NCBI ID   WP_001166496.1    Uniprot ID   Q2YSS2
Organism   Staphylococcus aureus strain CFSAN064037     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2228509..2239183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C9J78_RS11265 (C9J78_11260) - 2228725..2229792 (+) 1068 WP_000980142.1 membrane protein -
  C9J78_RS11270 (C9J78_11265) - 2229943..2230986 (+) 1044 WP_001030765.1 alpha/beta hydrolase -
  C9J78_RS11275 (C9J78_11270) - 2231316..2231744 (+) 429 WP_000198501.1 hypothetical protein -
  C9J78_RS11280 (C9J78_11275) - 2231951..2232457 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  C9J78_RS11285 (C9J78_11280) graX 2232570..2233493 (+) 924 WP_000802959.1 auxiliary protein GraX/ApsX -
  C9J78_RS11290 (C9J78_11285) braR 2233509..2234183 (+) 675 WP_001166496.1 response regulator transcription factor GraR/ApsR Regulator
  C9J78_RS11295 (C9J78_11290) graS 2234176..2235216 (+) 1041 WP_001061261.1 histidine kinase GraS/ApsS -
  C9J78_RS11300 (C9J78_11295) vraF 2235360..2236121 (+) 762 WP_000985996.1 ABC transporter ATP-binding protein VraF -
  C9J78_RS11305 (C9J78_11300) vraG 2236111..2238000 (+) 1890 WP_000143629.1 ABC transporter permease VraG -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26093.93 Da        Isoelectric Point: 4.3563

>NTDB_id=238918 C9J78_RS11290 WP_001166496.1 2233509..2234183(+) (braR) [Staphylococcus aureus strain CFSAN064037]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAIIDLSKDSIQKGDDTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEISMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=238918 C9J78_RS11290 WP_001166496.1 2233509..2234183(+) (braR) [Staphylococcus aureus strain CFSAN064037]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CCATTATAGATTTATCAAAAGATAGTATACAAAAAGGTGACGATACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACCAAAAAAAATCAAATCGTTTCGAGAGATACAATTATCACTGCATTATGGGATGATGAAGCATTTGT
TAGTGATAATACGTTAACAGTAAATGTGAATCGTTTACGAAAAAAATTATCTGAAATAAGTATGGATAGTGCAATCGAAA
CAAAAGTAGGAAAAGGATATATGGCTCATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(149-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q2YSS2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

40.455

98.214

0.397