Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | C8257_RS02340 | Genome accession | NZ_CP028162 |
| Coordinates | 490067..490432 (+) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain MRSN12280 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 485067..495432
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C8257_RS02310 (C8257_02310) | pyrR | 485689..486201 (-) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| C8257_RS02315 (C8257_02315) | ruvX | 486313..486747 (-) | 435 | WP_003084575.1 | Holliday junction resolvase RuvX | - |
| C8257_RS02320 (C8257_02320) | - | 486747..487316 (-) | 570 | WP_003084577.1 | YqgE/AlgH family protein | - |
| C8257_RS02325 (C8257_02325) | - | 487365..488258 (-) | 894 | WP_003084580.1 | TonB family protein | - |
| C8257_RS02330 (C8257_02330) | gshB | 488405..489358 (-) | 954 | WP_003100943.1 | glutathione synthase | - |
| C8257_RS02335 (C8257_02335) | pilG | 489613..490020 (+) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| C8257_RS02340 (C8257_02340) | pilH | 490067..490432 (+) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| C8257_RS02345 (C8257_02345) | - | 490483..491019 (+) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| C8257_RS02350 (C8257_02350) | pilJ | 491104..493152 (+) | 2049 | WP_003084592.1 | chemotaxis chemoreceptor PilJ | - |
| C8257_RS02355 (C8257_02355) | pilK | 493213..494088 (+) | 876 | WP_003084594.1 | type 4 fimbrial methyltransferase PilK | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=238669 C8257_RS02340 WP_003084587.1 490067..490432(+) (pilH) [Pseudomonas aeruginosa strain MRSN12280]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=238669 C8257_RS02340 WP_003084587.1 490067..490432(+) (pilH) [Pseudomonas aeruginosa strain MRSN12280]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAGTTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |