Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | LPL_RS13105 | Genome accession | NC_006369 |
| Coordinates | 2963763..2964830 (-) | Length | 355 a.a. |
| NCBI ID | WP_011216540.1 | Uniprot ID | Q5WTC8 |
| Organism | Legionella pneumophila str. Lens | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2958763..2969830
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS13080 (lpl2592) | - | 2959056..2959772 (-) | 717 | WP_011216535.1 | dienelactone hydrolase family protein | - |
| LPL_RS13085 (lpl2593) | - | 2960055..2960921 (+) | 867 | WP_011216536.1 | alpha/beta hydrolase | - |
| LPL_RS13090 (lpl2594) | rpoH | 2961053..2961907 (-) | 855 | WP_011216537.1 | RNA polymerase sigma factor RpoH | - |
| LPL_RS13095 (lpl2595) | ftsX | 2962203..2963132 (-) | 930 | WP_011216538.1 | permease-like cell division protein FtsX | - |
| LPL_RS13100 (lpl2596) | ftsE | 2963126..2963776 (-) | 651 | WP_011216539.1 | cell division ATP-binding protein FtsE | - |
| LPL_RS13105 (lpl2597) | pilA | 2963763..2964830 (-) | 1068 | WP_011216540.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| LPL_RS13110 (lpl2598) | - | 2964893..2966218 (+) | 1326 | WP_011216541.1 | M16 family metallopeptidase | - |
| LPL_RS13115 (lpl2599) | - | 2966215..2967519 (+) | 1305 | WP_011216542.1 | M16 family metallopeptidase | - |
| LPL_RS13120 (lpl2600) | rsmD | 2967516..2968061 (+) | 546 | WP_011216543.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| LPL_RS13125 (lpl2601) | dotD | 2968136..2968627 (+) | 492 | WP_011216544.1 | type IVB secretion system lipoprotein DotD | - |
| LPL_RS13130 (lpl2602) | dotC | 2968608..2969519 (+) | 912 | WP_011216545.1 | type IVB secretion system protein DotC | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 39056.55 Da Isoelectric Point: 6.1218
>NTDB_id=23862 LPL_RS13105 WP_011216540.1 2963763..2964830(-) (pilA) [Legionella pneumophila str. Lens]
MIKWFKRNQNSEPNLDTEEQQDHAESSRESRLEEPRELTAKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGDAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI
MIKWFKRNQNSEPNLDTEEQQDHAESSRESRLEEPRELTAKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGDAVYQTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI
Nucleotide
Download Length: 1068 bp
>NTDB_id=23862 LPL_RS13105 WP_011216540.1 2963763..2964830(-) (pilA) [Legionella pneumophila str. Lens]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAGCAAGATCATGCCGAAAGCAG
CAGGGAATCCAGGCTTGAAGAGCCCCGGGAACTGACTGCCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGACGCAGTTTATCAGACTTTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTTATGTTAGCTGCGGGGGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATACCGAAGAGCAGCAAGATCATGCCGAAAGCAG
CAGGGAATCCAGGCTTGAAGAGCCCCGGGAACTGACTGCCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTGGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCAAGAAAGCAACTGTCTAATGGTGACGCAGTTTATCAGACTTTAAAGACAAATTTGCAAACGATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTTATGTTAGCTGCGGGGGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATTTTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.353 |
95.775 |
0.501 |