Detailed information NTG0238614

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CEQ48_RS05650
• Genome accession: NZ_CP022353
• Coordinates: 41790..42797 (+)
• Length: 335 a.a.
• NCBI ID: WP_089070597.1
• Uniprot ID: A0AAU8WCI9
• Organism: Vibrio tarriae strain 2521-89
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 36790..47797

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEQ48_RS05630 (CEQ48_05630)	metJ	36796..37113 (+)	318	WP_000796267.1	met regulon transcriptional regulator MetJ	-
CEQ48_RS05635 (CEQ48_05635)	-	37225..38502 (-)	1278	WP_001278589.1	malic enzyme-like NAD(P)-binding protein	-
CEQ48_RS05640 (CEQ48_05640)	rpmE	38810..39028 (-)	219	WP_000643446.1	50S ribosomal protein L31	-
CEQ48_RS05645 (CEQ48_05645)	priA	39283..41487 (+)	2205	WP_089072356.1	primosomal protein N'	-
CEQ48_RS05650 (CEQ48_05650)	cytR	41790..42797 (+)	1008	WP_089070597.1	DNA-binding transcriptional regulator CytR	Regulator
CEQ48_RS05655 (CEQ48_05655)	-	42969..43520 (+)	552	WP_089070598.1	SPOR domain-containing protein	-
CEQ48_RS05660 (CEQ48_05660)	hslV	43657..44214 (+)	558	WP_000208249.1	ATP-dependent protease subunit HslV	-
CEQ48_RS05665 (CEQ48_05665)	hslU	44280..45611 (+)	1332	WP_001293366.1	HslU--HslV peptidase ATPase subunit	-
CEQ48_RS05670 (CEQ48_05670)	-	45715..46632 (+)	918	WP_089070599.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CEQ48_RS05675 (CEQ48_05675)	rraA	46707..47222 (+)	516	WP_000456236.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 37058.66 Da
• Isoelectric Point: 7.0760

>NTDB_id=238614 CEQ48_RS05650 WP_089070597.1 41790..42797(+) (cytR) [Vibrio tarriae strain 2521-89]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPQHAALCQFRHQGYQQALRRAGITMNPTYCIFGDFTFEAGAKAVRQLLALPEQPTA
IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLE
TKLVVRESAAPPSKR

Nucleotide

• Length: 1008 bp

>NTDB_id=238614 CEQ48_RS05650 WP_089070597.1 41790..42797(+) (cytR) [Vibrio tarriae strain 2521-89]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTTTCAACCGCGACCGTGTCTCGTGCGTTGATGAATCCAGAGAA
AGTCTCGTCGTCCACTCGTAAACGAGTGGAAGAGGCCGTGCTGGAAGCGGGTTACTCACCAAATTCTTTAGCGCGCAATT
TGCGGCGTAATGAATCGAAAACCATCGTTGCTATCGTGCCAGATATCTGTGATCCCTACTTTTCTGAGATCATTCGCGGT
ATTGAAGATGCCGCGATGGAGCACGGTTATCTGGTGCTGTTGGGGGATAGTGGTCAACAGAAGCGTCGGGAAAACTCGTT
CGTTAATCTGGTGTTTACCAAACAGGCAGACGGTATGTTACTGTTGGGTACGGATTTGCCGTTTGATGTGAGTAAACCTG
AGCAGAAAAACCTACCACCTATGGTGATGGCGTGTGAATTTGCGCCAGAGCTAGAACTACCAACGGTACATATCGATAAT
CTGACCTCGGCATTTGAGGCGGTAAACTATTTAACTCAGCTTGGGCACAAACGGATTGCGCAGATCTCTGGCCCACAACA
TGCTGCGCTGTGTCAATTCCGTCATCAAGGCTATCAACAGGCGTTGCGTCGTGCTGGCATCACCATGAACCCGACTTACT
GCATTTTTGGCGATTTCACTTTTGAAGCCGGGGCAAAAGCGGTGCGTCAGCTGTTGGCATTGCCGGAGCAGCCGACCGCG
ATTTTCTGTCATAACGATACGATGGCAATTGGTGCGATTCAGGAAGCGAAGCGACTTGGCTTGCGCGTACCACAAGATCT
CTCCGTGGTCGGTTTTGACGATATTCAGTTTGCCCAGTACTGCGATCCCCCATTAACGACCATTTCGCAGCCGCGTTATG
AGATTGGCCGTCAAGCCATGTTGATGATGCTTGAGTTACTACGGGGGCATGATGTGCGTGCCGGCTCGCGTCTTTTGGAA
ACCAAACTAGTGGTGCGTGAGAGTGCTGCGCCTCCAAGCAAGAGATAG

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	99.403	100	0.994
cytR	Vibrio parahaemolyticus RIMD 2210633	90.719	99.701	0.904