Detailed information    

insolico Bioinformatically predicted

Overview

Name   kpsS   Type   Regulator
Locus tag   CAV_RS07035 Genome accession   NZ_CP022347
Coordinates   1385751..1386932 (+) Length   393 a.a.
NCBI ID   WP_094325824.1    Uniprot ID   A0A222MYS0
Organism   Campylobacter avium LMG 24591     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380751..1391932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAV_RS07015 (CAV_1391) - 1381486..1382733 (+) 1248 WP_094325820.1 adenylosuccinate synthase -
  CAV_RS07020 (CAV_1392) - 1382730..1383158 (+) 429 WP_094325821.1 flagellar export protein FliJ -
  CAV_RS07025 (CAV_1393) - 1383151..1383681 (+) 531 WP_094325822.1 MotE family protein -
  CAV_RS07030 (CAV_1394) - 1383709..1385760 (+) 2052 WP_094325823.1 capsular polysaccharide biosynthesis protein -
  CAV_RS07035 (CAV_1395) kpsS 1385751..1386932 (+) 1182 WP_094325824.1 capsular biosynthesis protein Regulator
  CAV_RS07040 (CAV_1396) - 1386986..1388074 (+) 1089 WP_094325825.1 hypothetical protein -
  CAV_RS07045 (CAV_1397) - 1388084..1389442 (+) 1359 WP_094325826.1 cytochrome P450 -
  CAV_RS07050 (CAV_1398) - 1389446..1389793 (+) 348 WP_094325827.1 hypothetical protein -
  CAV_RS07055 (CAV_1399) - 1389882..1390481 (+) 600 WP_157676350.1 outer membrane beta-barrel protein -

Sequence

Protein


Download         Length: 393 a.a.        Molecular weight: 46518.06 Da        Isoelectric Point: 10.3858

>NTDB_id=238579 CAV_RS07035 WP_094325824.1 1385751..1386932(+) (kpsS) [Campylobacter avium LMG 24591]
MELKQHVKNFKNKNVLLLQSPIGPYFRRLASLMKKENANVFKINFNGGDRFFYPFNATTYKGNFNHFRYFFKDFCVQNKI
QAVVLFNDCRPVHRIAIKIAKRLKIDVFIFEEGYLRPSFITLEKNGVNANSPIPREKSFYLGKDFIVKDEHKNIKGAFKY
MAFYAFLYWFFAFLLSAFHNNSLHHRSLSPLELLPWIRSLFRKILYKFSEKNINKKIQKDLKNSYFIAILQVYNDTQVSR
HYKYKSVEVFIRKTIASFANNARSKHYLIFKHHPMDRGYKNYAKLIESLSKQYNISDRVIYVHDSHLPTVLSNALGCVVI
NSTVGLSALYHNCPLKVCGEAFYNIDGITYQKSLDLFWRQAHSYKPNYRMYANLRAYLLINNQINSNFYKNKL

Nucleotide


Download         Length: 1182 bp        

>NTDB_id=238579 CAV_RS07035 WP_094325824.1 1385751..1386932(+) (kpsS) [Campylobacter avium LMG 24591]
ATGGAACTAAAACAGCATGTAAAAAATTTTAAAAACAAAAATGTCTTATTGTTGCAAAGTCCTATAGGTCCTTATTTTAG
ACGCTTAGCCTCTTTGATGAAAAAAGAAAATGCAAATGTTTTTAAGATAAATTTTAACGGAGGAGATAGATTTTTCTACC
CTTTTAATGCCACAACTTACAAGGGAAATTTCAACCACTTTAGATATTTTTTCAAAGATTTTTGTGTGCAAAATAAAATT
CAAGCCGTAGTTTTGTTTAATGACTGCAGGCCAGTGCACAGAATAGCTATAAAAATAGCTAAGAGGCTAAAAATAGATGT
GTTCATCTTTGAGGAAGGGTATTTAAGGCCGAGTTTTATAACCTTGGAAAAAAACGGAGTAAATGCAAATTCGCCCATCC
CTAGAGAAAAAAGCTTTTACCTAGGTAAAGATTTTATAGTAAAAGATGAGCACAAAAACATCAAGGGAGCCTTTAAGTAT
ATGGCCTTTTATGCTTTTTTGTATTGGTTTTTTGCATTTTTATTATCCGCGTTTCATAACAACTCCTTGCACCACCGCTC
ATTAAGTCCTTTAGAGCTTTTGCCTTGGATTCGTTCTTTGTTTAGAAAAATTCTTTATAAATTCAGCGAAAAAAATATAA
ATAAAAAAATACAAAAAGACCTTAAAAATTCATACTTTATAGCCATTTTACAAGTCTATAATGATACGCAGGTTTCAAGG
CATTACAAATACAAAAGTGTGGAAGTTTTCATAAGAAAAACCATCGCATCCTTTGCAAACAACGCTAGAAGCAAGCATTA
TTTAATATTTAAACATCATCCCATGGATAGAGGATACAAAAACTACGCAAAGCTTATAGAAAGCCTTAGCAAGCAATACA
ATATAAGCGACAGGGTTATTTATGTGCATGATTCTCACCTGCCAACAGTTTTAAGCAATGCCTTAGGCTGCGTAGTCATA
AACTCGACAGTTGGACTGTCTGCCTTGTATCACAACTGCCCTTTAAAAGTATGCGGAGAAGCGTTTTACAACATAGATGG
CATTACTTATCAAAAATCCCTTGATTTGTTTTGGAGGCAAGCACACTCTTACAAGCCAAATTACAGAATGTACGCAAATT
TAAGAGCTTATTTGCTCATCAACAACCAAATCAACTCAAATTTCTATAAAAACAAGCTTTAA

Domains

Predicted by InterproScan.

Capsule polysaccharide biosynthesis protein (Capsule_synth)

(81-389)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A222MYS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

58.854

97.71

0.575

Multiple sequence alignment