Detailed information
Bioinformatically predicted
Overview
| Name | lrpC | Type | Machinery gene |
| Locus tag | TRNA_RS24065 | Genome accession | NC_006270 |
| Coordinates | 522222..522650 (+) | Length | 142 a.a. |
| NCBI ID | WP_003179050.1 | Uniprot ID | Q65N91 |
| Organism | Bacillus licheniformis DSM 13 = ATCC 14580 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 517222..527650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TRNA_RS24030 (BL02818) | - | 517506..518009 (+) | 504 | WP_003179036.1 | D-lyxose/D-mannose family sugar isomerase | - |
| TRNA_RS24035 (BL02824) | - | 518026..518409 (-) | 384 | WP_003179038.1 | DUF2283 domain-containing protein | - |
| TRNA_RS24040 (BL02819) | - | 518495..518917 (+) | 423 | WP_003179040.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| TRNA_RS24045 (BL02820) | - | 519370..520179 (+) | 810 | WP_003179042.1 | lipid II flippase Amj family protein | - |
| TRNA_RS24050 (BL02821) | - | 520344..521285 (+) | 942 | WP_003179044.1 | LCP family protein | - |
| TRNA_RS24055 (BL02825) | - | 521317..521610 (-) | 294 | WP_003179046.1 | DUF3817 domain-containing protein | - |
| TRNA_RS24060 (BL02826) | - | 521694..522104 (-) | 411 | WP_003179047.1 | carboxymuconolactone decarboxylase family protein | - |
| TRNA_RS24065 (BL02822) | lrpC | 522222..522650 (+) | 429 | WP_003179050.1 | Lrp/AsnC family transcriptional regulator | Machinery gene |
| TRNA_RS24070 (BL02823) | - | 522724..524907 (+) | 2184 | WP_025805960.1 | DNA topoisomerase III | - |
| TRNA_RS24075 (BL00148) | - | 525595..527415 (+) | 1821 | WP_011197562.1 | APC family permease | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16264.89 Da Isoelectric Point: 7.7014
>NTDB_id=23855 TRNA_RS24065 WP_003179050.1 522222..522650(+) (lrpC) [Bacillus licheniformis DSM 13 = ATCC 14580]
MKIDDLDFKIIAELKKDSRLSMRELGRKISLSAPSVTERVRRLESFGVIKKYTLDIDYQKVGLPVSCIIEATVKNGEYER
FKAYIERLPNIEFCYRIAGAACYMLKINAESLAKIEAFINETSPYAQTVTHVIFSEIETKES
MKIDDLDFKIIAELKKDSRLSMRELGRKISLSAPSVTERVRRLESFGVIKKYTLDIDYQKVGLPVSCIIEATVKNGEYER
FKAYIERLPNIEFCYRIAGAACYMLKINAESLAKIEAFINETSPYAQTVTHVIFSEIETKES
Nucleotide
Download Length: 429 bp
>NTDB_id=23855 TRNA_RS24065 WP_003179050.1 522222..522650(+) (lrpC) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGAAAATTGATGATCTCGATTTTAAAATCATAGCCGAATTAAAGAAAGACAGCCGTTTATCGATGCGGGAGCTGGGCAG
GAAGATCAGCCTTTCGGCACCGTCTGTGACCGAAAGAGTCAGGCGGCTCGAATCGTTCGGCGTCATAAAAAAATATACGC
TGGACATCGATTACCAAAAGGTCGGTCTTCCCGTTTCCTGCATCATTGAAGCAACGGTGAAAAACGGGGAATACGAGAGG
TTTAAAGCGTATATCGAACGCCTCCCGAACATTGAATTCTGCTACCGGATCGCGGGAGCTGCCTGCTATATGCTGAAAAT
CAATGCAGAGAGCCTGGCGAAGATCGAAGCGTTTATCAATGAAACGTCTCCATATGCCCAAACCGTGACACACGTGATTT
TTTCGGAAATTGAAACAAAGGAATCGTGA
ATGAAAATTGATGATCTCGATTTTAAAATCATAGCCGAATTAAAGAAAGACAGCCGTTTATCGATGCGGGAGCTGGGCAG
GAAGATCAGCCTTTCGGCACCGTCTGTGACCGAAAGAGTCAGGCGGCTCGAATCGTTCGGCGTCATAAAAAAATATACGC
TGGACATCGATTACCAAAAGGTCGGTCTTCCCGTTTCCTGCATCATTGAAGCAACGGTGAAAAACGGGGAATACGAGAGG
TTTAAAGCGTATATCGAACGCCTCCCGAACATTGAATTCTGCTACCGGATCGCGGGAGCTGCCTGCTATATGCTGAAAAT
CAATGCAGAGAGCCTGGCGAAGATCGAAGCGTTTATCAATGAAACGTCTCCATATGCCCAAACCGTGACACACGTGATTT
TTTCGGAAATTGAAACAAAGGAATCGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lrpC | Bacillus subtilis subsp. subtilis str. 168 |
80 |
98.592 |
0.789 |