Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | CCX84_RS04220 | Genome accession | NZ_CP022345 |
| Coordinates | 762023..763066 (+) | Length | 347 a.a. |
| NCBI ID | WP_001013180.1 | Uniprot ID | A0A9X5WLU9 |
| Organism | Bacillus thuringiensis strain c25 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 757023..768066
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCX84_RS04185 | - | 757392..757880 (+) | 489 | WP_061138953.1 | hypothetical protein | - |
| CCX84_RS04190 | - | 757915..758226 (-) | 312 | WP_001093237.1 | hypothetical protein | - |
| CCX84_RS04195 | - | 758479..758694 (+) | 216 | WP_001008326.1 | DUF3912 family protein | - |
| CCX84_RS04200 | - | 758782..759173 (+) | 392 | Protein_776 | hypothetical protein | - |
| CCX84_RS04205 | - | 759253..760647 (-) | 1395 | WP_001094331.1 | cation:dicarboxylase symporter family transporter | - |
| CCX84_RS04210 | - | 760754..760996 (-) | 243 | WP_000440721.1 | DUF2626 domain-containing protein | - |
| CCX84_RS04215 | - | 761122..761817 (-) | 696 | WP_000434125.1 | helix-turn-helix domain-containing protein | - |
| CCX84_RS04220 | comGA | 762023..763066 (+) | 1044 | WP_001013180.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CCX84_RS04225 | comGB | 763059..764090 (+) | 1032 | WP_000475184.1 | competence type IV pilus assembly protein ComGB | - |
| CCX84_RS04230 | comGC | 764102..764401 (+) | 300 | WP_001178686.1 | competence type IV pilus major pilin ComGC | - |
| CCX84_RS04235 | comGD | 764398..764853 (+) | 456 | WP_000813142.1 | competence type IV pilus minor pilin ComGD | - |
| CCX84_RS04240 | - | 764846..765148 (+) | 303 | WP_000829471.1 | hypothetical protein | - |
| CCX84_RS04245 | comGF | 765118..765588 (+) | 471 | WP_000923098.1 | competence type IV pilus minor pilin ComGF | - |
| CCX84_RS04250 | comGG | 765585..765956 (+) | 372 | WP_001231273.1 | competence type IV pilus minor pilin ComGG | - |
| CCX84_RS04255 | - | 766133..766783 (+) | 651 | WP_000183860.1 | 2OG-Fe(II) oxygenase | - |
| CCX84_RS04260 | - | 766899..767396 (+) | 498 | WP_000836650.1 | shikimate kinase | - |
| CCX84_RS04265 | - | 767435..767635 (+) | 201 | WP_000106083.1 | YqzE family protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 39157.52 Da Isoelectric Point: 8.5482
>NTDB_id=238523 CCX84_RS04220 WP_001013180.1 762023..763066(+) (comGA) [Bacillus thuringiensis strain c25]
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
MNGIEIFANTILKEACRVQASDLHIVPRQKDVAVQLRIGKDLMTRQCIEKEFGEKLVSHFKFLASMDIGEKRKPQNGSLY
LQIDGQEVYLRLSTLPTVYQESLVIRLHLQASVQPLSHLSLFPSTAAKLLSFLRYSQGLLVFTGPTGSGKTTTMYALLEV
IRKKKTRRIITLEDPVEKRSDDVLQIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTLH
TNDAKGAIIRFMDYGITRQEIEQSLLAVAAQRLVELKCPFCRGKCSTLCKSMRQVRQASIYELLYGHELKQALKEADGEC
VTYKHETLESSIRKGYALGFLEEDVYV
Nucleotide
Download Length: 1044 bp
>NTDB_id=238523 CCX84_RS04220 WP_001013180.1 762023..763066(+) (comGA) [Bacillus thuringiensis strain c25]
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTATTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGGGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
ATGAATGGGATTGAAATTTTTGCGAATACAATTTTAAAAGAAGCGTGTAGGGTACAAGCGTCAGATTTACATATTGTGCC
CCGGCAGAAGGATGTAGCAGTGCAACTACGTATAGGAAAAGATTTAATGACGAGACAGTGTATTGAAAAGGAGTTTGGAG
AAAAACTTGTCTCACATTTCAAATTTTTAGCATCTATGGACATAGGAGAGAAACGGAAGCCACAGAATGGTTCGTTGTAT
TTGCAAATTGATGGACAAGAAGTGTATTTACGCCTTTCAACACTTCCAACAGTATATCAAGAAAGTCTCGTTATTCGCCT
TCATTTACAAGCATCTGTTCAGCCCTTATCACATCTTTCGTTATTTCCAAGTACGGCAGCAAAACTACTCTCGTTTTTAC
GCTATTCACAGGGGCTACTCGTATTTACTGGACCGACTGGATCTGGGAAGACGACGACAATGTATGCATTATTAGAAGTA
ATTAGAAAAAAGAAAACACGTCGCATCATTACACTTGAAGATCCGGTTGAAAAAAGAAGTGACGATGTATTACAAATTCA
AATAAATGAAAAAGCGGGTCTCACATATGAAACAGGATTAAAGGCTATTTTACGTCATGATCCAGATATTATTTTAGTCG
GTGAAATCCGGGATGAGGAAACAGCAAAAATAGCTATAAGGGCAAGTTTGACAGGACATTTAGTAATGACAACGCTGCAT
ACGAATGATGCGAAAGGAGCAATCATTCGTTTCATGGATTATGGTATAACGAGGCAAGAGATTGAACAGTCTTTATTGGC
TGTAGCTGCACAGCGACTTGTCGAATTGAAGTGTCCGTTTTGCAGAGGAAAGTGCTCAACTTTATGTAAATCAATGAGGC
AAGTAAGGCAAGCAAGCATTTATGAGCTACTATATGGACATGAGTTAAAACAAGCACTTAAAGAAGCAGATGGAGAATGT
GTTACTTACAAACATGAGACTTTAGAATCGTCAATACGAAAAGGATATGCTTTAGGTTTTTTAGAAGAAGATGTTTATGT
TTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
55.908 |
100 |
0.559 |